Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZDHHC24 (zinc finger DHHC-type containing 24)

Identity

Other alias-
HGNC (Hugo) ZDHHC24
LocusID (NCBI) 254359
Atlas_Id 75914
Location 11q13.2  [Link to chromosome band 11q13]
Location_base_pair Starts at 66521082 and ends at 66546238 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PACS1 (11q13.1) / ZDHHC24 (11q13.2)RAB11FIP1 (8p11.23) / ZDHHC24 (11q13.2)ZDHHC24 (11q13.2) / C2CD3 (11q13.4)
ZDHHC24 (11q13.2) / SLC27A1 (19p13.11)RAB11FIP1 ZDHHC24PACS1 ZDHHC24

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZDHHC24   27387
Cards
Entrez_Gene (NCBI)ZDHHC24  254359  zinc finger DHHC-type containing 24
Aliases
GeneCards (Weizmann)ZDHHC24
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:66521082-66546238 [Contig_View]  ZDHHC24 [Vega]
TCGA cBioPortalZDHHC24
AceView (NCBI)ZDHHC24
Genatlas (Paris)ZDHHC24
WikiGenes254359
SOURCE (Princeton)ZDHHC24
Genetics Home Reference (NIH)ZDHHC24
Genomic and cartography
GoldenPath hg38 (UCSC)ZDHHC24  -     chr11:66521082-66546238 -  11q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZDHHC24  -     11q13.2   [Description]    (hg19-Feb_2009)
EnsemblZDHHC24 - 11q13.2 [CytoView hg19]  ZDHHC24 - 11q13.2 [CytoView hg38]
Mapping of homologs : NCBIZDHHC24 [Mapview hg19]  ZDHHC24 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK301787 AK310561 AY358448 BC005015 BC057833
RefSeq transcript (Entrez)NM_001348571 NM_207340
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZDHHC24
Cluster EST : UnigeneHs.659933 [ NCBI ]
CGAP (NCI)Hs.659933
Gene ExpressionZDHHC24 [ NCBI-GEO ]   ZDHHC24 [ EBI - ARRAY_EXPRESS ]   ZDHHC24 [ SEEK ]   ZDHHC24 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)254359
GTEX Portal (Tissue expression)ZDHHC24
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UX98   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UX98  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UX98
Splice isoforms : SwissVarQ6UX98
Catalytic activity : Enzyme2.3.1.225 [ Enzyme-Expasy ]   2.3.1.2252.3.1.225 [ IntEnz-EBI ]   2.3.1.225 [ BRENDA ]   2.3.1.225 [ KEGG ]   
PhosPhoSitePlusQ6UX98
Domaine pattern : Prosite (Expaxy)DHHC (PS50216)   
Domains : Interpro (EBI)Palmitoyltrfase_DHHC   
Domain families : Pfam (Sanger)zf-DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam01529   
Conserved Domain (NCBI)ZDHHC24
DMDM Disease mutations254359
Blocks (Seattle)ZDHHC24
SuperfamilyQ6UX98
Peptide AtlasQ6UX98
HPRD17325
IPIIPI00305425   IPI00984856   IPI00980918   
Protein Interaction databases
DIP (DOE-UCLA)Q6UX98
IntAct (EBI)Q6UX98
BioGRIDZDHHC24
STRING (EMBL)ZDHHC24
ZODIACZDHHC24
Ontologies - Pathways
QuickGOQ6UX98
Ontology : AmiGOprotein binding  integral component of membrane  protein-cysteine S-palmitoyltransferase activity  
Ontology : EGO-EBIprotein binding  integral component of membrane  protein-cysteine S-palmitoyltransferase activity  
NDEx NetworkZDHHC24
Atlas of Cancer Signalling NetworkZDHHC24
Wikipedia pathwaysZDHHC24
Orthology - Evolution
OrthoDB254359
Phylogenetic Trees/Animal Genes : TreeFamZDHHC24
HOVERGENQ6UX98
HOGENOMQ6UX98
Homologs : HomoloGeneZDHHC24
Homology/Alignments : Family Browser (UCSC)ZDHHC24
Gene fusions - Rearrangements
Fusion: TCGARAB11FIP1 ZDHHC24
Fusion: TCGAPACS1 ZDHHC24
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC24 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC24
dbVarZDHHC24
ClinVarZDHHC24
1000_GenomesZDHHC24 
Exome Variant ServerZDHHC24
ExAC (Exome Aggregation Consortium)ZDHHC24 (select the gene name)
Genetic variants : HAPMAP254359
Genomic Variants (DGV)ZDHHC24 [DGVbeta]
DECIPHERZDHHC24 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZDHHC24 
Mutations
ICGC Data PortalZDHHC24 
TCGA Data PortalZDHHC24 
Broad Tumor PortalZDHHC24
OASIS PortalZDHHC24 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC24  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZDHHC24
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZDHHC24
DgiDB (Drug Gene Interaction Database)ZDHHC24
DoCM (Curated mutations)ZDHHC24 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC24 (select a term)
intoGenZDHHC24
Cancer3DZDHHC24(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZDHHC24
Genetic Testing Registry ZDHHC24
NextProtQ6UX98 [Medical]
TSGene254359
GENETestsZDHHC24
Target ValidationZDHHC24
Huge Navigator ZDHHC24 [HugePedia]
snp3D : Map Gene to Disease254359
BioCentury BCIQZDHHC24
ClinGenZDHHC24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD254359
Chemical/Pharm GKB GenePA142670531
Clinical trialZDHHC24
Miscellaneous
canSAR (ICR)ZDHHC24 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZDHHC24
EVEXZDHHC24
GoPubMedZDHHC24
iHOPZDHHC24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:44:14 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.