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ZDHHC5 (zinc finger DHHC-type containing 5)

Identity

Alias_symbol (synonym)KIAA1748
ZNF375
Other aliasDHHC5
HGNC (Hugo) ZDHHC5
LocusID (NCBI) 25921
Atlas_Id 55657
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 57435474 and ends at 57468659 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CPNE4 (3q22.1) / ZDHHC5 (11q12.1)CTNND1 (11q12.1) / ZDHHC5 (11q12.1)MEF2D (1q22) / ZDHHC5 (11q12.1)
ZDHHC5 (11q12.1) / EPB41L5 (2q14.2)ZDHHC5 (11q12.1) / LCT (2q21.3)ZDHHC5 (11q12.1) / SMTNL1 (11q12.1)
ZDHHC5 (11q12.1) / ZDHHC5 (11q12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZDHHC5   18472
Cards
Entrez_Gene (NCBI)ZDHHC5  25921  zinc finger DHHC-type containing 5
AliasesDHHC5; ZNF375
GeneCards (Weizmann)ZDHHC5
Ensembl hg19 (Hinxton)ENSG00000156599 [Gene_View]  chr11:57435474-57468659 [Contig_View]  ZDHHC5 [Vega]
Ensembl hg38 (Hinxton)ENSG00000156599 [Gene_View]  chr11:57435474-57468659 [Contig_View]  ZDHHC5 [Vega]
ICGC DataPortalENSG00000156599
TCGA cBioPortalZDHHC5
AceView (NCBI)ZDHHC5
Genatlas (Paris)ZDHHC5
WikiGenes25921
SOURCE (Princeton)ZDHHC5
Genetics Home Reference (NIH)ZDHHC5
Genomic and cartography
GoldenPath hg19 (UCSC)ZDHHC5  -     chr11:57435474-57468659 +  11q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZDHHC5  -     11q12.1   [Description]    (hg38-Dec_2013)
EnsemblZDHHC5 - 11q12.1 [CytoView hg19]  ZDHHC5 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIZDHHC5 [Mapview hg19]  ZDHHC5 [Mapview hg38]
OMIM614586   
Gene and transcription
Genbank (Entrez)AB051535 AK023130 AK172807 AL117662 AY894889
RefSeq transcript (Entrez)NM_015457
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_167190 NW_004929380
Consensus coding sequences : CCDS (NCBI)ZDHHC5
Cluster EST : UnigeneHs.27239 [ NCBI ]
CGAP (NCI)Hs.27239
Alternative Splicing GalleryENSG00000156599
Gene ExpressionZDHHC5 [ NCBI-GEO ]   ZDHHC5 [ EBI - ARRAY_EXPRESS ]   ZDHHC5 [ SEEK ]   ZDHHC5 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25921
GTEX Portal (Tissue expression)ZDHHC5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9C0B5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9C0B5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9C0B5
Splice isoforms : SwissVarQ9C0B5
Catalytic activity : Enzyme2.3.1.225 [ Enzyme-Expasy ]   2.3.1.2252.3.1.225 [ IntEnz-EBI ]   2.3.1.225 [ BRENDA ]   2.3.1.225 [ KEGG ]   
PhosPhoSitePlusQ9C0B5
Domaine pattern : Prosite (Expaxy)ZF_DHHC (PS50216)   
Domains : Interpro (EBI)Znf_DHHC_palmitoyltrfase   
Domain families : Pfam (Sanger)zf-DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam01529   
Conserved Domain (NCBI)ZDHHC5
DMDM Disease mutations25921
Blocks (Seattle)ZDHHC5
SuperfamilyQ9C0B5
Human Protein AtlasENSG00000156599
Peptide AtlasQ9C0B5
HPRD15720
IPIIPI00328272   IPI00216546   IPI00980151   IPI00978789   IPI00976827   
Protein Interaction databases
DIP (DOE-UCLA)Q9C0B5
IntAct (EBI)Q9C0B5
FunCoupENSG00000156599
BioGRIDZDHHC5
STRING (EMBL)ZDHHC5
ZODIACZDHHC5
Ontologies - Pathways
QuickGOQ9C0B5
Ontology : AmiGOcytoplasm  plasma membrane  zinc ion binding  membrane  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  dendrite  
Ontology : EGO-EBIcytoplasm  plasma membrane  zinc ion binding  membrane  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  dendrite  
NDEx NetworkZDHHC5
Atlas of Cancer Signalling NetworkZDHHC5
Wikipedia pathwaysZDHHC5
Orthology - Evolution
OrthoDB25921
GeneTree (enSembl)ENSG00000156599
Phylogenetic Trees/Animal Genes : TreeFamZDHHC5
HOVERGENQ9C0B5
HOGENOMQ9C0B5
Homologs : HomoloGeneZDHHC5
Homology/Alignments : Family Browser (UCSC)ZDHHC5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC5
dbVarZDHHC5
ClinVarZDHHC5
1000_GenomesZDHHC5 
Exome Variant ServerZDHHC5
ExAC (Exome Aggregation Consortium)ZDHHC5 (select the gene name)
Genetic variants : HAPMAP25921
Genomic Variants (DGV)ZDHHC5 [DGVbeta]
DECIPHER (Syndromes)11:57435474-57468659  ENSG00000156599
CONAN: Copy Number AnalysisZDHHC5 
Mutations
ICGC Data PortalZDHHC5 
TCGA Data PortalZDHHC5 
Broad Tumor PortalZDHHC5
OASIS PortalZDHHC5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZDHHC5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZDHHC5
DgiDB (Drug Gene Interaction Database)ZDHHC5
DoCM (Curated mutations)ZDHHC5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC5 (select a term)
intoGenZDHHC5
Cancer3DZDHHC5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614586   
Orphanet
MedgenZDHHC5
Genetic Testing Registry ZDHHC5
NextProtQ9C0B5 [Medical]
TSGene25921
GENETestsZDHHC5
Huge Navigator ZDHHC5 [HugePedia]
snp3D : Map Gene to Disease25921
BioCentury BCIQZDHHC5
ClinGenZDHHC5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25921
Chemical/Pharm GKB GenePA38338
Clinical trialZDHHC5
Miscellaneous
canSAR (ICR)ZDHHC5 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZDHHC5
EVEXZDHHC5
GoPubMedZDHHC5
iHOPZDHHC5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:25:29 CEST 2017

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