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ZDHHC5 (zinc finger DHHC-type palmitoyltransferase 5)

Identity

Alias (NCBI)DHHC5
ZNF375
HGNC (Hugo) ZDHHC5
HGNC Alias symbKIAA1748
ZNF375
DHHC5
HGNC Previous namezinc finger DHHC-type containing 5
LocusID (NCBI) 25921
Atlas_Id 55657
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 57668114 and ends at 57701182 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CPNE4 (3q22.1) / ZDHHC5 (11q12.1)CTNND1 (11q12.1) / ZDHHC5 (11q12.1)MEF2D (1q22) / ZDHHC5 (11q12.1)
ZDHHC5 (11q12.1) / EPB41L5 (2q14.2)ZDHHC5 (11q12.1) / LCT (2q21.3)ZDHHC5 (11q12.1) / SMTNL1 (11q12.1)
ZDHHC5 (11q12.1) / ZDHHC5 (11q12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZDHHC5   18472
Cards
Entrez_Gene (NCBI)ZDHHC5    zinc finger DHHC-type palmitoyltransferase 5
AliasesDHHC5; ZNF375
GeneCards (Weizmann)ZDHHC5
Ensembl hg19 (Hinxton)ENSG00000156599 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000156599 [Gene_View]  ENSG00000156599 [Sequence]  chr11:57668114-57701182 [Contig_View]  ZDHHC5 [Vega]
ICGC DataPortalENSG00000156599
TCGA cBioPortalZDHHC5
AceView (NCBI)ZDHHC5
Genatlas (Paris)ZDHHC5
SOURCE (Princeton)ZDHHC5
Genetics Home Reference (NIH)ZDHHC5
Genomic and cartography
GoldenPath hg38 (UCSC)ZDHHC5  -     chr11:57668114-57701182 +  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZDHHC5  -     11q12.1   [Description]    (hg19-Feb_2009)
GoldenPathZDHHC5 - 11q12.1 [CytoView hg19]  ZDHHC5 - 11q12.1 [CytoView hg38]
ImmunoBaseENSG00000156599
Genome Data Viewer NCBIZDHHC5 [Mapview hg19]  
OMIM614586   
Gene and transcription
Genbank (Entrez)AB051535 AK023130 AK172807 AL117662 AY894889
RefSeq transcript (Entrez)NM_015457
Consensus coding sequences : CCDS (NCBI)ZDHHC5
Gene ExpressionZDHHC5 [ NCBI-GEO ]   ZDHHC5 [ EBI - ARRAY_EXPRESS ]   ZDHHC5 [ SEEK ]   ZDHHC5 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC5 [ Firebrowse - Broad ]
GenevisibleExpression of ZDHHC5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25921
GTEX Portal (Tissue expression)ZDHHC5
Human Protein AtlasENSG00000156599-ZDHHC5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9C0B5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9C0B5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9C0B5
PhosPhoSitePlusQ9C0B5
Domaine pattern : Prosite (Expaxy)DHHC (PS50216)   
Domains : Interpro (EBI)Palmitoyltrfase_DHHC   
Domain families : Pfam (Sanger)DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam01529   
Conserved Domain (NCBI)ZDHHC5
SuperfamilyQ9C0B5
AlphaFold pdb e-kbQ9C0B5   
Human Protein Atlas [tissue]ENSG00000156599-ZDHHC5 [tissue]
HPRD15720
Protein Interaction databases
DIP (DOE-UCLA)Q9C0B5
IntAct (EBI)Q9C0B5
BioGRIDZDHHC5
STRING (EMBL)ZDHHC5
ZODIACZDHHC5
Ontologies - Pathways
QuickGOQ9C0B5
Ontology : AmiGOprotein binding  plasma membrane  plasma membrane  membrane  integral component of membrane  palmitoyltransferase activity  palmitoyltransferase activity  protein palmitoylation  protein palmitoylation  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  dendrite  phagocytic vesicle  positive regulation of pattern recognition receptor signaling pathway  positive regulation of protein localization to plasma membrane  positive regulation of protein localization to phagocytic vesicle  
Ontology : EGO-EBIprotein binding  plasma membrane  plasma membrane  membrane  integral component of membrane  palmitoyltransferase activity  palmitoyltransferase activity  protein palmitoylation  protein palmitoylation  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  dendrite  phagocytic vesicle  positive regulation of pattern recognition receptor signaling pathway  positive regulation of protein localization to plasma membrane  positive regulation of protein localization to phagocytic vesicle  
NDEx NetworkZDHHC5
Atlas of Cancer Signalling NetworkZDHHC5
Wikipedia pathwaysZDHHC5
Orthology - Evolution
OrthoDB25921
GeneTree (enSembl)ENSG00000156599
Phylogenetic Trees/Animal Genes : TreeFamZDHHC5
Homologs : HomoloGeneZDHHC5
Homology/Alignments : Family Browser (UCSC)ZDHHC5
Gene fusions - Rearrangements
Fusion : QuiverZDHHC5
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC5
dbVarZDHHC5
ClinVarZDHHC5
MonarchZDHHC5
1000_GenomesZDHHC5 
Exome Variant ServerZDHHC5
GNOMAD BrowserENSG00000156599
Varsome BrowserZDHHC5
ACMGZDHHC5 variants
VarityQ9C0B5
Genomic Variants (DGV)ZDHHC5 [DGVbeta]
DECIPHERZDHHC5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZDHHC5 
Mutations
ICGC Data PortalZDHHC5 
TCGA Data PortalZDHHC5 
Broad Tumor PortalZDHHC5
OASIS PortalZDHHC5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC5  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZDHHC5
Mutations and Diseases : HGMDZDHHC5
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZDHHC5
DgiDB (Drug Gene Interaction Database)ZDHHC5
DoCM (Curated mutations)ZDHHC5
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC5
Cancer3DZDHHC5
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614586   
Orphanet
DisGeNETZDHHC5
MedgenZDHHC5
Genetic Testing Registry ZDHHC5
NextProtQ9C0B5 [Medical]
GENETestsZDHHC5
Target ValidationZDHHC5
Huge Navigator ZDHHC5 [HugePedia]
ClinGenZDHHC5
Clinical trials, drugs, therapy
MyCancerGenomeZDHHC5
Protein Interactions : CTDZDHHC5
Pharm GKB GenePA38338
PharosQ9C0B5
Clinical trialZDHHC5
Miscellaneous
canSAR (ICR)ZDHHC5
HarmonizomeZDHHC5
DataMed IndexZDHHC5
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZDHHC5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:38:54 CEST 2021

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