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ZDHHC6 (zinc finger DHHC-type containing 6)

Identity

Alias_symbol (synonym)ZNF376
FLJ21952
Other aliasDHHC-6
HGNC (Hugo) ZDHHC6
LocusID (NCBI) 64429
Atlas_Id 75917
Location 10q25.2  [Link to chromosome band 10q25]
Location_base_pair Starts at 112430290 and ends at 112446959 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZDHHC6 (10q25.2) / ACSL5 (10q25.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZDHHC6   19160
Cards
Entrez_Gene (NCBI)ZDHHC6  64429  zinc finger DHHC-type containing 6
AliasesDHHC-6; ZNF376
GeneCards (Weizmann)ZDHHC6
Ensembl hg19 (Hinxton)ENSG00000023041 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000023041 [Gene_View]  chr10:112430290-112446959 [Contig_View]  ZDHHC6 [Vega]
ICGC DataPortalENSG00000023041
TCGA cBioPortalZDHHC6
AceView (NCBI)ZDHHC6
Genatlas (Paris)ZDHHC6
WikiGenes64429
SOURCE (Princeton)ZDHHC6
Genetics Home Reference (NIH)ZDHHC6
Genomic and cartography
GoldenPath hg38 (UCSC)ZDHHC6  -     chr10:112430290-112446959 -  10q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZDHHC6  -     10q25.2   [Description]    (hg19-Feb_2009)
EnsemblZDHHC6 - 10q25.2 [CytoView hg19]  ZDHHC6 - 10q25.2 [CytoView hg38]
Mapping of homologs : NCBIZDHHC6 [Mapview hg19]  ZDHHC6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF267740 AI695150 AK025605 AK026369 AK054991
RefSeq transcript (Entrez)NM_001303134 NM_001351082 NM_001351083 NM_001351084 NM_001351085 NM_001351086 NM_022494
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZDHHC6
Cluster EST : UnigeneHs.196990 [ NCBI ]
CGAP (NCI)Hs.196990
Alternative Splicing GalleryENSG00000023041
Gene ExpressionZDHHC6 [ NCBI-GEO ]   ZDHHC6 [ EBI - ARRAY_EXPRESS ]   ZDHHC6 [ SEEK ]   ZDHHC6 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64429
GTEX Portal (Tissue expression)ZDHHC6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H6R6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H6R6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H6R6
Splice isoforms : SwissVarQ9H6R6
Catalytic activity : Enzyme2.3.1.225 [ Enzyme-Expasy ]   2.3.1.2252.3.1.225 [ IntEnz-EBI ]   2.3.1.225 [ BRENDA ]   2.3.1.225 [ KEGG ]   
PhosPhoSitePlusQ9H6R6
Domaine pattern : Prosite (Expaxy)DHHC (PS50216)   
Domains : Interpro (EBI)Palmitoyltrfase_DHHC    SH3_2   
Domain families : Pfam (Sanger)SH3_2 (PF07653)    zf-DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam07653    pfam01529   
Conserved Domain (NCBI)ZDHHC6
DMDM Disease mutations64429
Blocks (Seattle)ZDHHC6
SuperfamilyQ9H6R6
Human Protein AtlasENSG00000023041
Peptide AtlasQ9H6R6
HPRD15721
IPIIPI00008350   IPI00218129   
Protein Interaction databases
DIP (DOE-UCLA)Q9H6R6
IntAct (EBI)Q9H6R6
FunCoupENSG00000023041
BioGRIDZDHHC6
STRING (EMBL)ZDHHC6
ZODIACZDHHC6
Ontologies - Pathways
QuickGOQ9H6R6
Ontology : AmiGOendoplasmic reticulum  endoplasmic reticulum membrane  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  
Ontology : EGO-EBIendoplasmic reticulum  endoplasmic reticulum membrane  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  
NDEx NetworkZDHHC6
Atlas of Cancer Signalling NetworkZDHHC6
Wikipedia pathwaysZDHHC6
Orthology - Evolution
OrthoDB64429
GeneTree (enSembl)ENSG00000023041
Phylogenetic Trees/Animal Genes : TreeFamZDHHC6
HOVERGENQ9H6R6
HOGENOMQ9H6R6
Homologs : HomoloGeneZDHHC6
Homology/Alignments : Family Browser (UCSC)ZDHHC6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC6
dbVarZDHHC6
ClinVarZDHHC6
1000_GenomesZDHHC6 
Exome Variant ServerZDHHC6
ExAC (Exome Aggregation Consortium)ZDHHC6 (select the gene name)
Genetic variants : HAPMAP64429
Genomic Variants (DGV)ZDHHC6 [DGVbeta]
DECIPHERZDHHC6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZDHHC6 
Mutations
ICGC Data PortalZDHHC6 
TCGA Data PortalZDHHC6 
Broad Tumor PortalZDHHC6
OASIS PortalZDHHC6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZDHHC6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZDHHC6
DgiDB (Drug Gene Interaction Database)ZDHHC6
DoCM (Curated mutations)ZDHHC6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC6 (select a term)
intoGenZDHHC6
Cancer3DZDHHC6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZDHHC6
Genetic Testing Registry ZDHHC6
NextProtQ9H6R6 [Medical]
TSGene64429
GENETestsZDHHC6
Target ValidationZDHHC6
Huge Navigator ZDHHC6 [HugePedia]
snp3D : Map Gene to Disease64429
BioCentury BCIQZDHHC6
ClinGenZDHHC6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64429
Chemical/Pharm GKB GenePA38803
Clinical trialZDHHC6
Miscellaneous
canSAR (ICR)ZDHHC6 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZDHHC6
EVEXZDHHC6
GoPubMedZDHHC6
iHOPZDHHC6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:39 CEST 2017

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