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ZFAND1 (zinc finger, AN1-type domain 1)

Identity

Alias_nameszinc finger, AN1-type domain 1
Alias_symbol (synonym)FLJ14007
Other alias-
HGNC (Hugo) ZFAND1
LocusID (NCBI) 79752
Atlas_Id 75922
Location 8q21.13  [Link to chromosome band 8q21]
Location_base_pair Starts at 82613566 and ends at 82633539 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZFAND1   25858
Cards
Entrez_Gene (NCBI)ZFAND1  79752  zinc finger, AN1-type domain 1
Aliases
GeneCards (Weizmann)ZFAND1
Ensembl hg19 (Hinxton)ENSG00000104231 [Gene_View]  chr8:82613566-82633539 [Contig_View]  ZFAND1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000104231 [Gene_View]  chr8:82613566-82633539 [Contig_View]  ZFAND1 [Vega]
ICGC DataPortalENSG00000104231
TCGA cBioPortalZFAND1
AceView (NCBI)ZFAND1
Genatlas (Paris)ZFAND1
WikiGenes79752
SOURCE (Princeton)ZFAND1
Genetics Home Reference (NIH)ZFAND1
Genomic and cartography
GoldenPath hg19 (UCSC)ZFAND1  -     chr8:82613566-82633539 -  8q21.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZFAND1  -     8q21.13   [Description]    (hg38-Dec_2013)
EnsemblZFAND1 - 8q21.13 [CytoView hg19]  ZFAND1 - 8q21.13 [CytoView hg38]
Mapping of homologs : NCBIZFAND1 [Mapview hg19]  ZFAND1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024069 AK225195 AK304111 AL833030 BC022251
RefSeq transcript (Entrez)NM_001170796 NM_001170797 NM_024699
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008183 NW_004929339
Consensus coding sequences : CCDS (NCBI)ZFAND1
Cluster EST : UnigeneHs.655453 [ NCBI ]
CGAP (NCI)Hs.655453
Alternative Splicing GalleryENSG00000104231
Gene ExpressionZFAND1 [ NCBI-GEO ]   ZFAND1 [ EBI - ARRAY_EXPRESS ]   ZFAND1 [ SEEK ]   ZFAND1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZFAND1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79752
GTEX Portal (Tissue expression)ZFAND1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TCF1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TCF1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TCF1
Splice isoforms : SwissVarQ8TCF1
PhosPhoSitePlusQ8TCF1
Domaine pattern : Prosite (Expaxy)ZF_AN1 (PS51039)   
Domains : Interpro (EBI)Znf_AN1   
Domain families : Pfam (Sanger)zf-AN1 (PF01428)   
Domain families : Pfam (NCBI)pfam01428   
Domain families : Smart (EMBL)ZnF_AN1 (SM00154)  
Conserved Domain (NCBI)ZFAND1
DMDM Disease mutations79752
Blocks (Seattle)ZFAND1
SuperfamilyQ8TCF1
Human Protein AtlasENSG00000104231
Peptide AtlasQ8TCF1
HPRD07847
IPIIPI00291064   IPI00954805   IPI01013191   IPI00980695   IPI00977779   IPI00979253   IPI00976439   IPI01015516   IPI00977854   IPI00977164   IPI00981890   IPI00985185   IPI00981181   IPI00984525   IPI00978565   
Protein Interaction databases
DIP (DOE-UCLA)Q8TCF1
IntAct (EBI)Q8TCF1
FunCoupENSG00000104231
BioGRIDZFAND1
STRING (EMBL)ZFAND1
ZODIACZFAND1
Ontologies - Pathways
QuickGOQ8TCF1
Ontology : AmiGOzinc ion binding  
Ontology : EGO-EBIzinc ion binding  
NDEx NetworkZFAND1
Atlas of Cancer Signalling NetworkZFAND1
Wikipedia pathwaysZFAND1
Orthology - Evolution
OrthoDB79752
GeneTree (enSembl)ENSG00000104231
Phylogenetic Trees/Animal Genes : TreeFamZFAND1
HOVERGENQ8TCF1
HOGENOMQ8TCF1
Homologs : HomoloGeneZFAND1
Homology/Alignments : Family Browser (UCSC)ZFAND1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZFAND1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZFAND1
dbVarZFAND1
ClinVarZFAND1
1000_GenomesZFAND1 
Exome Variant ServerZFAND1
ExAC (Exome Aggregation Consortium)ZFAND1 (select the gene name)
Genetic variants : HAPMAP79752
Genomic Variants (DGV)ZFAND1 [DGVbeta]
DECIPHER (Syndromes)8:82613566-82633539  ENSG00000104231
CONAN: Copy Number AnalysisZFAND1 
Mutations
ICGC Data PortalZFAND1 
TCGA Data PortalZFAND1 
Broad Tumor PortalZFAND1
OASIS PortalZFAND1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZFAND1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZFAND1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZFAND1
DgiDB (Drug Gene Interaction Database)ZFAND1
DoCM (Curated mutations)ZFAND1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZFAND1 (select a term)
intoGenZFAND1
Cancer3DZFAND1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZFAND1
Genetic Testing Registry ZFAND1
NextProtQ8TCF1 [Medical]
TSGene79752
GENETestsZFAND1
Huge Navigator ZFAND1 [HugePedia]
snp3D : Map Gene to Disease79752
BioCentury BCIQZFAND1
ClinGenZFAND1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79752
Chemical/Pharm GKB GenePA142670532
Clinical trialZFAND1
Miscellaneous
canSAR (ICR)ZFAND1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZFAND1
EVEXZFAND1
GoPubMedZFAND1
iHOPZFAND1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:18 CET 2017

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