Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZFAND2A (zinc finger AN1-type containing 2A)

Identity

Alias_nameszinc finger, AN1-type domain 2A
Alias_symbol (synonym)AIRAP
Other alias
HGNC (Hugo) ZFAND2A
LocusID (NCBI) 90637
Atlas_Id 75923
Location 7p22.3  [Link to chromosome band 7p22]
Location_base_pair Starts at 1152907 and ends at 1160219 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZFAND2A (7p22.3) / ABHD3 (18q11.2)ZFAND2A (7p22.3) / APOL2 (22q12.3)ZFAND2A (7p22.3) / CDH11 (16q21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZFAND2A   28073
Cards
Entrez_Gene (NCBI)ZFAND2A  90637  zinc finger AN1-type containing 2A
AliasesAIRAP
GeneCards (Weizmann)ZFAND2A
Ensembl hg19 (Hinxton)ENSG00000178381 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178381 [Gene_View]  chr7:1152907-1160219 [Contig_View]  ZFAND2A [Vega]
ICGC DataPortalENSG00000178381
TCGA cBioPortalZFAND2A
AceView (NCBI)ZFAND2A
Genatlas (Paris)ZFAND2A
WikiGenes90637
SOURCE (Princeton)ZFAND2A
Genetics Home Reference (NIH)ZFAND2A
Genomic and cartography
GoldenPath hg38 (UCSC)ZFAND2A  -     chr7:1152907-1160219 -  7p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZFAND2A  -     7p22.3   [Description]    (hg19-Feb_2009)
EnsemblZFAND2A - 7p22.3 [CytoView hg19]  ZFAND2A - 7p22.3 [CytoView hg38]
Mapping of homologs : NCBIZFAND2A [Mapview hg19]  ZFAND2A [Mapview hg38]
OMIM610699   
Gene and transcription
Genbank (Entrez)AI435373 AK027118 AK290170 BC016963 BC029558
RefSeq transcript (Entrez)NM_182491
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZFAND2A
Cluster EST : UnigeneHs.648111 [ NCBI ]
CGAP (NCI)Hs.648111
Alternative Splicing GalleryENSG00000178381
Gene ExpressionZFAND2A [ NCBI-GEO ]   ZFAND2A [ EBI - ARRAY_EXPRESS ]   ZFAND2A [ SEEK ]   ZFAND2A [ MEM ]
Gene Expression Viewer (FireBrowse)ZFAND2A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90637
GTEX Portal (Tissue expression)ZFAND2A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N6M9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N6M9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N6M9
Splice isoforms : SwissVarQ8N6M9
PhosPhoSitePlusQ8N6M9
Domaine pattern : Prosite (Expaxy)ZF_AN1 (PS51039)   
Domains : Interpro (EBI)Znf_AN1   
Domain families : Pfam (Sanger)zf-AN1 (PF01428)   
Domain families : Pfam (NCBI)pfam01428   
Domain families : Smart (EMBL)ZnF_AN1 (SM00154)  
Conserved Domain (NCBI)ZFAND2A
DMDM Disease mutations90637
Blocks (Seattle)ZFAND2A
SuperfamilyQ8N6M9
Human Protein AtlasENSG00000178381
Peptide AtlasQ8N6M9
HPRD14277
IPIIPI00297395   IPI00657945   IPI00893671   
Protein Interaction databases
DIP (DOE-UCLA)Q8N6M9
IntAct (EBI)Q8N6M9
FunCoupENSG00000178381
BioGRIDZFAND2A
STRING (EMBL)ZFAND2A
ZODIACZFAND2A
Ontologies - Pathways
QuickGOQ8N6M9
Ontology : AmiGOproteasome complex  nucleus  cytoplasm  zinc ion binding  positive regulation of proteasomal ubiquitin-dependent protein catabolic process  cellular response to arsenic-containing substance  
Ontology : EGO-EBIproteasome complex  nucleus  cytoplasm  zinc ion binding  positive regulation of proteasomal ubiquitin-dependent protein catabolic process  cellular response to arsenic-containing substance  
NDEx NetworkZFAND2A
Atlas of Cancer Signalling NetworkZFAND2A
Wikipedia pathwaysZFAND2A
Orthology - Evolution
OrthoDB90637
GeneTree (enSembl)ENSG00000178381
Phylogenetic Trees/Animal Genes : TreeFamZFAND2A
HOVERGENQ8N6M9
HOGENOMQ8N6M9
Homologs : HomoloGeneZFAND2A
Homology/Alignments : Family Browser (UCSC)ZFAND2A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZFAND2A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZFAND2A
dbVarZFAND2A
ClinVarZFAND2A
1000_GenomesZFAND2A 
Exome Variant ServerZFAND2A
ExAC (Exome Aggregation Consortium)ZFAND2A (select the gene name)
Genetic variants : HAPMAP90637
Genomic Variants (DGV)ZFAND2A [DGVbeta]
DECIPHERZFAND2A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZFAND2A 
Mutations
ICGC Data PortalZFAND2A 
TCGA Data PortalZFAND2A 
Broad Tumor PortalZFAND2A
OASIS PortalZFAND2A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZFAND2A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZFAND2A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZFAND2A
DgiDB (Drug Gene Interaction Database)ZFAND2A
DoCM (Curated mutations)ZFAND2A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZFAND2A (select a term)
intoGenZFAND2A
Cancer3DZFAND2A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610699   
Orphanet
MedgenZFAND2A
Genetic Testing Registry ZFAND2A
NextProtQ8N6M9 [Medical]
TSGene90637
GENETestsZFAND2A
Target ValidationZFAND2A
Huge Navigator ZFAND2A [HugePedia]
snp3D : Map Gene to Disease90637
BioCentury BCIQZFAND2A
ClinGenZFAND2A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90637
Chemical/Pharm GKB GenePA142670526
Clinical trialZFAND2A
Miscellaneous
canSAR (ICR)ZFAND2A (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZFAND2A
EVEXZFAND2A
GoPubMedZFAND2A
iHOPZFAND2A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:49:40 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.