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ZFAND2B (zinc finger AN1-type containing 2B)

Identity

Alias_nameszinc finger, AN1-type 2B
zinc finger, AN1-type domain 2B
Alias_symbol (synonym)AIRAPL
Other alias
HGNC (Hugo) ZFAND2B
LocusID (NCBI) 130617
Atlas_Id 55140
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 219206784 and ends at 219209651 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CLU (8p21.1) / ZFAND2B (2q35)ZFAND2B (2q35) / ZFAND2B (2q35)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZFAND2B   25206
Cards
Entrez_Gene (NCBI)ZFAND2B  130617  zinc finger AN1-type containing 2B
AliasesAIRAPL
GeneCards (Weizmann)ZFAND2B
Ensembl hg19 (Hinxton)ENSG00000158552 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000158552 [Gene_View]  chr2:219206784-219209651 [Contig_View]  ZFAND2B [Vega]
ICGC DataPortalENSG00000158552
TCGA cBioPortalZFAND2B
AceView (NCBI)ZFAND2B
Genatlas (Paris)ZFAND2B
WikiGenes130617
SOURCE (Princeton)ZFAND2B
Genetics Home Reference (NIH)ZFAND2B
Genomic and cartography
GoldenPath hg38 (UCSC)ZFAND2B  -     chr2:219206784-219209651 +  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZFAND2B  -     2q35   [Description]    (hg19-Feb_2009)
EnsemblZFAND2B - 2q35 [CytoView hg19]  ZFAND2B - 2q35 [CytoView hg38]
Mapping of homologs : NCBIZFAND2B [Mapview hg19]  ZFAND2B [Mapview hg38]
OMIM613474   
Gene and transcription
Genbank (Entrez)AK074571 AK091345 AK292622 AK293714 BC018415
RefSeq transcript (Entrez)NM_001270998 NM_001270999 NM_138802
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZFAND2B
Cluster EST : UnigeneHs.534540 [ NCBI ]
CGAP (NCI)Hs.534540
Alternative Splicing GalleryENSG00000158552
Gene ExpressionZFAND2B [ NCBI-GEO ]   ZFAND2B [ EBI - ARRAY_EXPRESS ]   ZFAND2B [ SEEK ]   ZFAND2B [ MEM ]
Gene Expression Viewer (FireBrowse)ZFAND2B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)130617
GTEX Portal (Tissue expression)ZFAND2B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WV99   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WV99  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WV99
Splice isoforms : SwissVarQ8WV99
PhosPhoSitePlusQ8WV99
Domaine pattern : Prosite (Expaxy)UIM (PS50330)    ZF_AN1 (PS51039)   
Domains : Interpro (EBI)UIM_dom    Znf_AN1   
Domain families : Pfam (Sanger)zf-AN1 (PF01428)   
Domain families : Pfam (NCBI)pfam01428   
Domain families : Smart (EMBL)UIM (SM00726)  ZnF_AN1 (SM00154)  
Conserved Domain (NCBI)ZFAND2B
DMDM Disease mutations130617
Blocks (Seattle)ZFAND2B
PDB (SRS)1X4V   
PDB (PDBSum)1X4V   
PDB (IMB)1X4V   
PDB (RSDB)1X4V   
Structural Biology KnowledgeBase1X4V   
SCOP (Structural Classification of Proteins)1X4V   
CATH (Classification of proteins structures)1X4V   
SuperfamilyQ8WV99
Human Protein AtlasENSG00000158552
Peptide AtlasQ8WV99
HPRD11234
IPIIPI00103075   IPI00743841   IPI00916897   IPI00917830   IPI00916481   IPI00917743   IPI00916239   IPI00915830   IPI00915966   
Protein Interaction databases
DIP (DOE-UCLA)Q8WV99
IntAct (EBI)Q8WV99
FunCoupENSG00000158552
BioGRIDZFAND2B
STRING (EMBL)ZFAND2B
ZODIACZFAND2B
Ontologies - Pathways
QuickGOQ8WV99
Ontology : AmiGOprotein binding  endoplasmic reticulum  SRP-dependent cotranslational protein targeting to membrane, translocation  zinc ion binding  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum  SRP-dependent cotranslational protein targeting to membrane, translocation  zinc ion binding  
NDEx NetworkZFAND2B
Atlas of Cancer Signalling NetworkZFAND2B
Wikipedia pathwaysZFAND2B
Orthology - Evolution
OrthoDB130617
GeneTree (enSembl)ENSG00000158552
Phylogenetic Trees/Animal Genes : TreeFamZFAND2B
HOVERGENQ8WV99
HOGENOMQ8WV99
Homologs : HomoloGeneZFAND2B
Homology/Alignments : Family Browser (UCSC)ZFAND2B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZFAND2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZFAND2B
dbVarZFAND2B
ClinVarZFAND2B
1000_GenomesZFAND2B 
Exome Variant ServerZFAND2B
ExAC (Exome Aggregation Consortium)ZFAND2B (select the gene name)
Genetic variants : HAPMAP130617
Genomic Variants (DGV)ZFAND2B [DGVbeta]
DECIPHERZFAND2B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZFAND2B 
Mutations
ICGC Data PortalZFAND2B 
TCGA Data PortalZFAND2B 
Broad Tumor PortalZFAND2B
OASIS PortalZFAND2B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZFAND2B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZFAND2B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZFAND2B
DgiDB (Drug Gene Interaction Database)ZFAND2B
DoCM (Curated mutations)ZFAND2B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZFAND2B (select a term)
intoGenZFAND2B
Cancer3DZFAND2B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613474   
Orphanet
MedgenZFAND2B
Genetic Testing Registry ZFAND2B
NextProtQ8WV99 [Medical]
TSGene130617
GENETestsZFAND2B
Target ValidationZFAND2B
Huge Navigator ZFAND2B [HugePedia]
snp3D : Map Gene to Disease130617
BioCentury BCIQZFAND2B
ClinGenZFAND2B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD130617
Chemical/Pharm GKB GenePA142670527
Clinical trialZFAND2B
Miscellaneous
canSAR (ICR)ZFAND2B (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZFAND2B
EVEXZFAND2B
GoPubMedZFAND2B
iHOPZFAND2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:19:17 CEST 2017

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