Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZFP14 (ZFP14 zinc finger protein)

Identity

Alias_nameszinc finger protein 14 homolog (mouse)
Alias_symbol (synonym)KIAA1559
ZNF531
Other alias
HGNC (Hugo) ZFP14
LocusID (NCBI) 57677
Atlas_Id 75932
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 36334453 and ends at 36379203 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ANKRD27 (19q13.11) / ZFP14 (19q13.12)ZFP14 (19q13.12) / GNB1 (1p36.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZFP14   29312
Cards
Entrez_Gene (NCBI)ZFP14  57677  ZFP14 zinc finger protein
AliasesZNF531
GeneCards (Weizmann)ZFP14
Ensembl hg19 (Hinxton)ENSG00000142065 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000142065 [Gene_View]  chr19:36334453-36379203 [Contig_View]  ZFP14 [Vega]
ICGC DataPortalENSG00000142065
TCGA cBioPortalZFP14
AceView (NCBI)ZFP14
Genatlas (Paris)ZFP14
WikiGenes57677
SOURCE (Princeton)ZFP14
Genetics Home Reference (NIH)ZFP14
Genomic and cartography
GoldenPath hg38 (UCSC)ZFP14  -     chr19:36334453-36379203 -  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZFP14  -     19q13.12   [Description]    (hg19-Feb_2009)
EnsemblZFP14 - 19q13.12 [CytoView hg19]  ZFP14 - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBIZFP14 [Mapview hg19]  ZFP14 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB046779 AK293103 AL699477 BC144691 BC152446
RefSeq transcript (Entrez)NM_001297619 NM_020917
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZFP14
Cluster EST : UnigeneHs.35524 [ NCBI ]
CGAP (NCI)Hs.35524
Alternative Splicing GalleryENSG00000142065
Gene ExpressionZFP14 [ NCBI-GEO ]   ZFP14 [ EBI - ARRAY_EXPRESS ]   ZFP14 [ SEEK ]   ZFP14 [ MEM ]
Gene Expression Viewer (FireBrowse)ZFP14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57677
GTEX Portal (Tissue expression)ZFP14
Human Protein AtlasENSG00000142065-ZFP14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HCL3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HCL3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HCL3
Splice isoforms : SwissVarQ9HCL3
PhosPhoSitePlusQ9HCL3
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZFP14
DMDM Disease mutations57677
Blocks (Seattle)ZFP14
SuperfamilyQ9HCL3
Human Protein Atlas [tissue]ENSG00000142065-ZFP14 [tissue]
Peptide AtlasQ9HCL3
HPRD17217
IPIIPI00218189   IPI00874073   
Protein Interaction databases
DIP (DOE-UCLA)Q9HCL3
IntAct (EBI)Q9HCL3
FunCoupENSG00000142065
BioGRIDZFP14
STRING (EMBL)ZFP14
ZODIACZFP14
Ontologies - Pathways
QuickGOQ9HCL3
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZFP14
Atlas of Cancer Signalling NetworkZFP14
Wikipedia pathwaysZFP14
Orthology - Evolution
OrthoDB57677
GeneTree (enSembl)ENSG00000142065
Phylogenetic Trees/Animal Genes : TreeFamZFP14
HOVERGENQ9HCL3
HOGENOMQ9HCL3
Homologs : HomoloGeneZFP14
Homology/Alignments : Family Browser (UCSC)ZFP14
Gene fusions - Rearrangements
Fusion: Tumor Portal ZFP14
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZFP14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZFP14
dbVarZFP14
ClinVarZFP14
1000_GenomesZFP14 
Exome Variant ServerZFP14
ExAC (Exome Aggregation Consortium)ENSG00000142065
GNOMAD BrowserENSG00000142065
Genetic variants : HAPMAP57677
Genomic Variants (DGV)ZFP14 [DGVbeta]
DECIPHERZFP14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZFP14 
Mutations
ICGC Data PortalZFP14 
TCGA Data PortalZFP14 
Broad Tumor PortalZFP14
OASIS PortalZFP14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZFP14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZFP14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZFP14
DgiDB (Drug Gene Interaction Database)ZFP14
DoCM (Curated mutations)ZFP14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZFP14 (select a term)
intoGenZFP14
Cancer3DZFP14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZFP14
Genetic Testing Registry ZFP14
NextProtQ9HCL3 [Medical]
TSGene57677
GENETestsZFP14
Target ValidationZFP14
Huge Navigator ZFP14 [HugePedia]
snp3D : Map Gene to Disease57677
BioCentury BCIQZFP14
ClinGenZFP14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57677
Chemical/Pharm GKB GenePA145147576
Clinical trialZFP14
Miscellaneous
canSAR (ICR)ZFP14 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZFP14
EVEXZFP14
GoPubMedZFP14
iHOPZFP14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:36:26 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.