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ZFP2 (ZFP2 zinc finger protein)

Identity

Alias_nameszinc finger protein 2 homolog (mouse)
Alias_symbol (synonym)FLJ21628
ZNF751
Other aliaszfp-2
HGNC (Hugo) ZFP2
LocusID (NCBI) 80108
Atlas_Id 75933
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 178895894 and ends at 178933211 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FAM19A5 (22q13.32) / ZFP2 (5q35.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZFP2   26138
Cards
Entrez_Gene (NCBI)ZFP2  80108  ZFP2 zinc finger protein
AliasesZNF751; zfp-2
GeneCards (Weizmann)ZFP2
Ensembl hg19 (Hinxton)ENSG00000198939 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198939 [Gene_View]  chr5:178895894-178933211 [Contig_View]  ZFP2 [Vega]
ICGC DataPortalENSG00000198939
TCGA cBioPortalZFP2
AceView (NCBI)ZFP2
Genatlas (Paris)ZFP2
WikiGenes80108
SOURCE (Princeton)ZFP2
Genetics Home Reference (NIH)ZFP2
Genomic and cartography
GoldenPath hg38 (UCSC)ZFP2  -     chr5:178895894-178933211 +  5q35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZFP2  -     5q35.3   [Description]    (hg19-Feb_2009)
EnsemblZFP2 - 5q35.3 [CytoView hg19]  ZFP2 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBIZFP2 [Mapview hg19]  ZFP2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK025281 AK131367 BC132779 BC132781 BC142989
RefSeq transcript (Entrez)NM_030613
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZFP2
Cluster EST : UnigeneHs.654533 [ NCBI ]
CGAP (NCI)Hs.654533
Alternative Splicing GalleryENSG00000198939
Gene ExpressionZFP2 [ NCBI-GEO ]   ZFP2 [ EBI - ARRAY_EXPRESS ]   ZFP2 [ SEEK ]   ZFP2 [ MEM ]
Gene Expression Viewer (FireBrowse)ZFP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80108
GTEX Portal (Tissue expression)ZFP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZN57   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZN57  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZN57
Splice isoforms : SwissVarQ6ZN57
PhosPhoSitePlusQ6ZN57
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam00096    pfam13912   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZFP2
DMDM Disease mutations80108
Blocks (Seattle)ZFP2
SuperfamilyQ6ZN57
Human Protein AtlasENSG00000198939
Peptide AtlasQ6ZN57
HPRD08639
IPIIPI00105638   IPI00978420   IPI00974213   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZN57
IntAct (EBI)Q6ZN57
FunCoupENSG00000198939
BioGRIDZFP2
STRING (EMBL)ZFP2
ZODIACZFP2
Ontologies - Pathways
QuickGOQ6ZN57
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZFP2
Atlas of Cancer Signalling NetworkZFP2
Wikipedia pathwaysZFP2
Orthology - Evolution
OrthoDB80108
GeneTree (enSembl)ENSG00000198939
Phylogenetic Trees/Animal Genes : TreeFamZFP2
HOVERGENQ6ZN57
HOGENOMQ6ZN57
Homologs : HomoloGeneZFP2
Homology/Alignments : Family Browser (UCSC)ZFP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZFP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZFP2
dbVarZFP2
ClinVarZFP2
1000_GenomesZFP2 
Exome Variant ServerZFP2
ExAC (Exome Aggregation Consortium)ZFP2 (select the gene name)
Genetic variants : HAPMAP80108
Genomic Variants (DGV)ZFP2 [DGVbeta]
DECIPHERZFP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZFP2 
Mutations
ICGC Data PortalZFP2 
TCGA Data PortalZFP2 
Broad Tumor PortalZFP2
OASIS PortalZFP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZFP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZFP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZFP2
DgiDB (Drug Gene Interaction Database)ZFP2
DoCM (Curated mutations)ZFP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZFP2 (select a term)
intoGenZFP2
Cancer3DZFP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZFP2
Genetic Testing Registry ZFP2
NextProtQ6ZN57 [Medical]
TSGene80108
GENETestsZFP2
Target ValidationZFP2
Huge Navigator ZFP2 [HugePedia]
snp3D : Map Gene to Disease80108
BioCentury BCIQZFP2
ClinGenZFP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80108
Chemical/Pharm GKB GenePA142670528
Clinical trialZFP2
Miscellaneous
canSAR (ICR)ZFP2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZFP2
EVEXZFP2
GoPubMedZFP2
iHOPZFP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:42 CEST 2017

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