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ZFP92 (ZFP92 zinc finger protein)

Identity

Alias_nameszinc finger protein homologous to Zfp92 in mouse
zinc finger protein 92 homolog (mouse)
Alias_symbol (synonym)ZNF897
Other alias
HGNC (Hugo) ZFP92
LocusID (NCBI) 139735
Atlas_Id 75944
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 153418323 and ends at 153421628 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZFP92   12865
Cards
Entrez_Gene (NCBI)ZFP92  139735  ZFP92 zinc finger protein
AliasesZNF897
GeneCards (Weizmann)ZFP92
Ensembl hg19 (Hinxton)ENSG00000189420 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189420 [Gene_View]  chrX:153418323-153421628 [Contig_View]  ZFP92 [Vega]
ICGC DataPortalENSG00000189420
TCGA cBioPortalZFP92
AceView (NCBI)ZFP92
Genatlas (Paris)ZFP92
WikiGenes139735
SOURCE (Princeton)ZFP92
Genetics Home Reference (NIH)ZFP92
Genomic and cartography
GoldenPath hg38 (UCSC)ZFP92  -     chrX:153418323-153421628 +  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZFP92  -     Xq28   [Description]    (hg19-Feb_2009)
EnsemblZFP92 - Xq28 [CytoView hg19]  ZFP92 - Xq28 [CytoView hg38]
Mapping of homologs : NCBIZFP92 [Mapview hg19]  ZFP92 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057819
RefSeq transcript (Entrez)NM_001136273
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZFP92
Cluster EST : UnigeneHs.552181 [ NCBI ]
CGAP (NCI)Hs.552181
Alternative Splicing GalleryENSG00000189420
Gene ExpressionZFP92 [ NCBI-GEO ]   ZFP92 [ EBI - ARRAY_EXPRESS ]   ZFP92 [ SEEK ]   ZFP92 [ MEM ]
Gene Expression Viewer (FireBrowse)ZFP92 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)139735
GTEX Portal (Tissue expression)ZFP92
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NM28   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NM28  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NM28
Splice isoforms : SwissVarA6NM28
PhosPhoSitePlusA6NM28
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZFP92
DMDM Disease mutations139735
Blocks (Seattle)ZFP92
SuperfamilyA6NM28
Human Protein AtlasENSG00000189420
Peptide AtlasA6NM28
IPIIPI00047476   
Protein Interaction databases
DIP (DOE-UCLA)A6NM28
IntAct (EBI)A6NM28
FunCoupENSG00000189420
BioGRIDZFP92
STRING (EMBL)ZFP92
ZODIACZFP92
Ontologies - Pathways
QuickGOA6NM28
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZFP92
Atlas of Cancer Signalling NetworkZFP92
Wikipedia pathwaysZFP92
Orthology - Evolution
OrthoDB139735
GeneTree (enSembl)ENSG00000189420
Phylogenetic Trees/Animal Genes : TreeFamZFP92
HOVERGENA6NM28
HOGENOMA6NM28
Homologs : HomoloGeneZFP92
Homology/Alignments : Family Browser (UCSC)ZFP92
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZFP92 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZFP92
dbVarZFP92
ClinVarZFP92
1000_GenomesZFP92 
Exome Variant ServerZFP92
ExAC (Exome Aggregation Consortium)ZFP92 (select the gene name)
Genetic variants : HAPMAP139735
Genomic Variants (DGV)ZFP92 [DGVbeta]
DECIPHERZFP92 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZFP92 
Mutations
ICGC Data PortalZFP92 
TCGA Data PortalZFP92 
Broad Tumor PortalZFP92
OASIS PortalZFP92 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZFP92  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZFP92
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZFP92
DgiDB (Drug Gene Interaction Database)ZFP92
DoCM (Curated mutations)ZFP92 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZFP92 (select a term)
intoGenZFP92
Cancer3DZFP92(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZFP92
Genetic Testing Registry ZFP92
NextProtA6NM28 [Medical]
TSGene139735
GENETestsZFP92
Target ValidationZFP92
Huge Navigator ZFP92 [HugePedia]
snp3D : Map Gene to Disease139735
BioCentury BCIQZFP92
ClinGenZFP92
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD139735
Chemical/Pharm GKB GenePA37454
Clinical trialZFP92
Miscellaneous
canSAR (ICR)ZFP92 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZFP92
EVEXZFP92
GoPubMedZFP92
iHOPZFP92
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:18 CEST 2017

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