Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZFYVE27 (zinc finger FYVE-type containing 27)

Identity

Alias (NCBI)PROTRUDIN
SPG33
HGNC (Hugo) ZFYVE27
HGNC Alias symbFLJ32919
SPG33
HGNC Alias nameprotrudin
HGNC Previous namezinc finger, FYVE domain containing 27
LocusID (NCBI) 118813
Atlas_Id 75954
Location 10q24.2  [Link to chromosome band 10q24]
Location_base_pair Starts at 97737128 and ends at 97760895 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SAMD11 (1p36.33) / ZFYVE27 (10q24.2)ZFYVE27 (10q24.2) / LOC100507412 (-)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ZFYVE27   26559
Cards
Entrez_Gene (NCBI)ZFYVE27    zinc finger FYVE-type containing 27
AliasesPROTRUDIN; SPG33
GeneCards (Weizmann)ZFYVE27
Ensembl hg19 (Hinxton)ENSG00000155256 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155256 [Gene_View]  ENSG00000155256 [Sequence]  chr10:97737128-97760895 [Contig_View]  ZFYVE27 [Vega]
ICGC DataPortalENSG00000155256
TCGA cBioPortalZFYVE27
AceView (NCBI)ZFYVE27
Genatlas (Paris)ZFYVE27
SOURCE (Princeton)ZFYVE27
Genetics Home Reference (NIH)ZFYVE27
Genomic and cartography
GoldenPath hg38 (UCSC)ZFYVE27  -     chr10:97737128-97760895 +  10q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZFYVE27  -     10q24.2   [Description]    (hg19-Feb_2009)
GoldenPathZFYVE27 - 10q24.2 [CytoView hg19]  ZFYVE27 - 10q24.2 [CytoView hg38]
ImmunoBaseENSG00000155256
Genome Data Viewer NCBIZFYVE27 [Mapview hg19]  
OMIM610243   610244   
Gene and transcription
Genbank (Entrez)AK057481 AK074876 AK097945 AK296295 AK296588
RefSeq transcript (Entrez)NM_001002261 NM_001002262 NM_001174119 NM_001174120 NM_001174121 NM_001174122 NM_001385871 NM_001385875 NM_001385876 NM_001385877 NM_001385878 NM_001385879 NM_001385880 NM_001385881 NM_001385882 NM_001385883 NM_001385884 NM_001385885 NM_001385886 NM_001385887 NM_001385888 NM_001385889 NM_001385890 NM_001385891 NM_001385892 NM_001385893 NM_001385894 NM_001385895 NM_001385896 NM_001385897 NM_001385898 NM_001385899 NM_001385900 NM_001385901 NM_001385902 NM_001385903 NM_001385904 NM_001385905 NM_001385906 NM_001385908 NM_001385911 NM_001385915 NM_001385916 NM_001385918 NM_001385919 NM_144588
Consensus coding sequences : CCDS (NCBI)ZFYVE27
Gene ExpressionZFYVE27 [ NCBI-GEO ]   ZFYVE27 [ EBI - ARRAY_EXPRESS ]   ZFYVE27 [ SEEK ]   ZFYVE27 [ MEM ]
Gene Expression Viewer (FireBrowse)ZFYVE27 [ Firebrowse - Broad ]
GenevisibleExpression of ZFYVE27 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)118813
GTEX Portal (Tissue expression)ZFYVE27
Human Protein AtlasENSG00000155256-ZFYVE27 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZFYVE27
Human Protein Atlas [tissue]ENSG00000155256-ZFYVE27 [tissue]
HPRD15735
Protein Interaction databases
BioGRIDZFYVE27
STRING (EMBL)ZFYVE27
ZODIACZFYVE27
Ontologies - Pathways
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZFYVE27
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:29:07 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.