Atlas of Genetics and Cytogenetics in Oncology and Haematology

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ZFYVE27 (zinc finger FYVE-type containing 27)

Identity

Alias (NCBI)PROTRUDIN
SPG33
HGNC (Hugo) ZFYVE27
HGNC Alias symbFLJ32919
SPG33
HGNC Alias nameprotrudin
HGNC Previous namezinc finger, FYVE domain containing 27
LocusID (NCBI) 118813
Atlas_Id 75954
Location 10q24.2  [Link to chromosome band 10q24]
Location_base_pair Starts at 97737128 and ends at 97760895 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SAMD11 (1p36.33) / ZFYVE27 (10q24.2)ZFYVE27 (10q24.2) / LOC100507412 (-)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ZFYVE27   26559
Cards
Entrez_Gene (NCBI)ZFYVE27    zinc finger FYVE-type containing 27
AliasesPROTRUDIN; SPG33
GeneCards (Weizmann)ZFYVE27
Ensembl hg19 (Hinxton)ENSG00000155256 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155256 [Gene_View]  ENSG00000155256 [Sequence]  chr10:97737128-97760895 [Contig_View]  ZFYVE27 [Vega]
ICGC DataPortalENSG00000155256
TCGA cBioPortalZFYVE27
AceView (NCBI)ZFYVE27
Genatlas (Paris)ZFYVE27
SOURCE (Princeton)ZFYVE27
Genetics Home Reference (NIH)ZFYVE27
Genomic and cartography
GoldenPath hg38 (UCSC)ZFYVE27  -     chr10:97737128-97760895 +  10q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZFYVE27  -     10q24.2   [Description]    (hg19-Feb_2009)
GoldenPathZFYVE27 - 10q24.2 [CytoView hg19]  ZFYVE27 - 10q24.2 [CytoView hg38]
ImmunoBaseENSG00000155256
Genome Data Viewer NCBIZFYVE27 [Mapview hg19]  
OMIM610243   610244   
Gene and transcription
Genbank (Entrez)AK057481 AK074876 AK097945 AK296295 AK296588
RefSeq transcript (Entrez)NM_001002261 NM_001002262 NM_001174119 NM_001174120 NM_001174121 NM_001174122 NM_001385871 NM_001385875 NM_001385876 NM_001385877 NM_001385878 NM_001385879 NM_001385880 NM_001385881 NM_001385882 NM_001385883 NM_001385884 NM_001385885 NM_001385886 NM_001385887 NM_001385888 NM_001385889 NM_001385890 NM_001385891 NM_001385892 NM_001385893 NM_001385894 NM_001385895 NM_001385896 NM_001385897 NM_001385898 NM_001385899 NM_001385900 NM_001385901 NM_001385902 NM_001385903 NM_001385904 NM_001385905 NM_001385906 NM_001385908 NM_001385911 NM_001385915 NM_001385916 NM_001385918 NM_001385919 NM_144588
Consensus coding sequences : CCDS (NCBI)ZFYVE27
Gene ExpressionZFYVE27 [ NCBI-GEO ]   ZFYVE27 [ EBI - ARRAY_EXPRESS ]   ZFYVE27 [ SEEK ]   ZFYVE27 [ MEM ]
Gene Expression Viewer (FireBrowse)ZFYVE27 [ Firebrowse - Broad ]
GenevisibleExpression of ZFYVE27 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)118813
GTEX Portal (Tissue expression)ZFYVE27
Human Protein AtlasENSG00000155256-ZFYVE27 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZFYVE27
Human Protein Atlas [tissue]ENSG00000155256-ZFYVE27 [tissue]
HPRD15735
Protein Interaction databases
BioGRIDZFYVE27
STRING (EMBL)ZFYVE27
ZODIACZFYVE27
Ontologies - Pathways
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZFYVE27
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:29:07 CEST 2021
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