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ZGLP1 (zinc finger, GATA-like protein 1)

Identity

Other namesGATAD3
GLP-1
GLP1
HGNC (Hugo) ZGLP1
LocusID (NCBI) 100125288
Location 19p13.2
Location_base_pair Starts at 10415479 and ends at 10420233 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)ZGLP1   37245
Entrez_Gene (NCBI)ZGLP1  100125288  zinc finger, GATA-like protein 1
Cards
GeneCards (Weizmann)ZGLP1
Ensembl (Hinxton)ENSG00000220201 [Gene_View]  chr19:10415479-10420233 [Contig_View]  ZGLP1 [Vega]
AceView (NCBI)ZGLP1
Genatlas (Paris)ZGLP1
SOURCE (Stanford)NM_001103167
Genomic and cartography
GoldenPath (UCSC)ZGLP1  -  19p13.2   chr19:10415479-10420233 -  19p13.2   [Description]    (hg19-Feb_2009)
EnsemblZGLP1 - 19p13.2 [CytoView]
Mapping of homologs : NCBIZGLP1 [Mapview]
OMIM611639   
Gene and transcription
Genbank (Entrez)AK096830 BC029904 BC044225 CK826281
RefSeq transcript (SRS)NM_001103167
RefSeq transcript (Entrez)NM_001103167
RefSeq genomic (SRS)AC_000151 NC_000019 NC_018930 NT_011295 NW_001838483 NW_004078098
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NT_011295 NW_001838483 NW_004078098
Consensus coding sequences : CCDS (NCBI)ZGLP1
Cluster EST : UnigeneHs.709296 [ SRS ] Hs.709296 [ NCBI ]
CGAP (NCI)Hs.709296
Alternative Splicing : Fast-db (Paris)GSHG0015493
Alternative Splicing GalleryENSG00000220201
Gene ExpressionZGLP1 [ NCBI-GEO ]   ZGLP1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C6A0 (SRS) P0C6A0 (Uniprot)
NextProtP0C6A0
With graphics : InterProP0C6A0
Splice isoforms : SwissVarP0C6A0(Swissvar)
Domaine pattern : Prosite (SRS)GATA_ZN_FINGER_1 (PS00344)    GATA_ZN_FINGER_2 (PS50114)   
Domaine pattern : Prosite (Expaxy)GATA_ZN_FINGER_1 (PS00344)    GATA_ZN_FINGER_2 (PS50114)   
Domains : Interpro (SRS)Znf_GATA    Znf_NHR/GATA   
Domains : Interpro (EBI)Znf_GATA    Znf_NHR/GATA   
Related proteins : CluSTrP0C6A0
Domain families : Pfam (SRS)GATA (PF00320)   
Domain families : Pfam (Sanger)GATA (PF00320)   
Domain families : Pfam (NCBI)pfam00320   
Domain families : Smart (EMBL)ZnF_GATA (SM00401)  
DMDM100125288
Blocks (Seattle)P0C6A0
Human Protein AtlasENSG00000220201
IPIIPI00643174   IPI00892638   
Protein Interaction databases
DIP (DOE-UCLA)P0C6A0
IntAct (EBI)P0C6A0
FunCoupENSG00000220201
REACTOMEZGLP1
Protein Interaction Database100125288
BioGRIDZGLP1
InParanoidP0C6A0
Interologous Interaction database P0C6A0
IntegromeDBZGLP1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ZGLP1
SNP (GeneSNP Utah)ZGLP1
SNP : HGBaseZGLP1
Genetic variants : HAPMAPZGLP1
Somatic Mutations in Cancer : COSMICZGLP1 
CONAN: Copy Number AnalysisZGLP1 
Mutations and Diseases : HGMDZGLP1
OMIM611639   
GENETests611639   
Disease Genetic AssociationZGLP1
Huge Navigator ZGLP1 [HugePedia]  ZGLP1 [HugeCancerGEM]
Genomic VariantsZGLP1  ZGLP1 [DGVbeta]
ClinVarZGLP1
snp3D : Map Gene to Disease100125288
General knowledge
Homologs : HomoloGeneZGLP1
Homology/Alignments : Family Browser (UCSC)ZGLP1
Phylogenetic Trees/Animal Genes : TreeFamZGLP1
Chemical/Protein Interactions : CTD100125288
Chemical/Pharm GKB GenePA165394820
Clinical trialZGLP1
Cancer Resource (Charite)ENSG00000220201
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-dependent  multicellular organismal development  spermatogenesis  zinc ion binding  positive regulation of protein binding  positive regulation of peptidyl-serine phosphorylation  negative regulation of apoptotic process  sequence-specific DNA binding  oocyte development  positive regulation of ERK1 and ERK2 cascade  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-dependent  multicellular organismal development  spermatogenesis  zinc ion binding  positive regulation of protein binding  positive regulation of peptidyl-serine phosphorylation  negative regulation of apoptotic process  sequence-specific DNA binding  oocyte development  positive regulation of ERK1 and ERK2 cascade  
Other databases
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
PubGeneZGLP1
iHOPZGLP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:37:35 CEST 2013
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