Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZHX1-C8orf76 (ZHX1-C8orf76 readthrough)

Identity

Other alias-
HGNC (Hugo) ZHX1-C8orf76
LocusID (NCBI) 100533106
Atlas_Id 75958
Location 8q24.13  [Link to chromosome band 8q24]
Location_base_pair Starts at 123226189 and ends at 123274487 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZHX1-C8orf76 (8q24.13) / MYLK-AS1 (3q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZHX1-C8orf76   42975
Cards
Entrez_Gene (NCBI)ZHX1-C8orf76  100533106  ZHX1-C8orf76 readthrough
Aliases
GeneCards (Weizmann)ZHX1-C8orf76
Ensembl hg19 (Hinxton)ENSG00000259305 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259305 [Gene_View]  chr8:123226189-123274487 [Contig_View]  ZHX1-C8orf76 [Vega]
ICGC DataPortalENSG00000259305
TCGA cBioPortalZHX1-C8orf76
AceView (NCBI)ZHX1-C8orf76
Genatlas (Paris)ZHX1-C8orf76
WikiGenes100533106
SOURCE (Princeton)ZHX1-C8orf76
Genetics Home Reference (NIH)ZHX1-C8orf76
Genomic and cartography
GoldenPath hg38 (UCSC)ZHX1-C8orf76  -     chr8:123226189-123274487 -  8q24.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZHX1-C8orf76  -     8q24.13   [Description]    (hg19-Feb_2009)
EnsemblZHX1-C8orf76 - 8q24.13 [CytoView hg19]  ZHX1-C8orf76 - 8q24.13 [CytoView hg38]
Mapping of homologs : NCBIZHX1-C8orf76 [Mapview hg19]  ZHX1-C8orf76 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC012379 BP340117 CA424676
RefSeq transcript (Entrez)NM_001204180
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZHX1-C8orf76
Cluster EST : UnigeneHs.707401 [ NCBI ]
CGAP (NCI)Hs.707401
Alternative Splicing GalleryENSG00000259305
Gene ExpressionZHX1-C8orf76 [ NCBI-GEO ]   ZHX1-C8orf76 [ EBI - ARRAY_EXPRESS ]   ZHX1-C8orf76 [ SEEK ]   ZHX1-C8orf76 [ MEM ]
Gene Expression Viewer (FireBrowse)ZHX1-C8orf76 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100533106
GTEX Portal (Tissue expression)ZHX1-C8orf76
Human Protein AtlasENSG00000259305-ZHX1-C8orf76 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96EF9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96EF9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96EF9
Splice isoforms : SwissVarQ96EF9
PhosPhoSitePlusQ96EF9
Domains : Interpro (EBI)TPR-like_helical_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZHX1-C8orf76
DMDM Disease mutations100533106
Blocks (Seattle)ZHX1-C8orf76
SuperfamilyQ96EF9
Human Protein Atlas [tissue]ENSG00000259305-ZHX1-C8orf76 [tissue]
Peptide AtlasQ96EF9
IPIIPI00064351   IPI00477025   
Protein Interaction databases
DIP (DOE-UCLA)Q96EF9
IntAct (EBI)Q96EF9
FunCoupENSG00000259305
BioGRIDZHX1-C8orf76
STRING (EMBL)ZHX1-C8orf76
ZODIACZHX1-C8orf76
Ontologies - Pathways
QuickGOQ96EF9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkZHX1-C8orf76
Atlas of Cancer Signalling NetworkZHX1-C8orf76
Wikipedia pathwaysZHX1-C8orf76
Orthology - Evolution
OrthoDB100533106
GeneTree (enSembl)ENSG00000259305
Phylogenetic Trees/Animal Genes : TreeFamZHX1-C8orf76
HOVERGENQ96EF9
HOGENOMQ96EF9
Homologs : HomoloGeneZHX1-C8orf76
Homology/Alignments : Family Browser (UCSC)ZHX1-C8orf76
Gene fusions - Rearrangements
Tumor Fusion PortalZHX1-C8orf76
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZHX1-C8orf76 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZHX1-C8orf76
dbVarZHX1-C8orf76
ClinVarZHX1-C8orf76
1000_GenomesZHX1-C8orf76 
Exome Variant ServerZHX1-C8orf76
ExAC (Exome Aggregation Consortium)ENSG00000259305
GNOMAD BrowserENSG00000259305
Genetic variants : HAPMAP100533106
Genomic Variants (DGV)ZHX1-C8orf76 [DGVbeta]
DECIPHERZHX1-C8orf76 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZHX1-C8orf76 
Mutations
ICGC Data PortalZHX1-C8orf76 
TCGA Data PortalZHX1-C8orf76 
Broad Tumor PortalZHX1-C8orf76
OASIS PortalZHX1-C8orf76 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZHX1-C8orf76
BioMutasearch ZHX1-C8orf76
DgiDB (Drug Gene Interaction Database)ZHX1-C8orf76
DoCM (Curated mutations)ZHX1-C8orf76 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZHX1-C8orf76 (select a term)
intoGenZHX1-C8orf76
Cancer3DZHX1-C8orf76(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZHX1-C8orf76
MedgenZHX1-C8orf76
Genetic Testing Registry ZHX1-C8orf76
NextProtQ96EF9 [Medical]
TSGene100533106
GENETestsZHX1-C8orf76
Target ValidationZHX1-C8orf76
Huge Navigator ZHX1-C8orf76 [HugePedia]
snp3D : Map Gene to Disease100533106
BioCentury BCIQZHX1-C8orf76
ClinGenZHX1-C8orf76
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100533106
Clinical trialZHX1-C8orf76
Miscellaneous
canSAR (ICR)ZHX1-C8orf76 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZHX1-C8orf76
EVEXZHX1-C8orf76
GoPubMedZHX1-C8orf76
iHOPZHX1-C8orf76
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:19:13 CET 2017

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