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ZMYM4-AS1 (ZMYM4 antisense RNA 1)

Identity

Alias_namesZMYM4 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) ZMYM4-AS1
LocusID (NCBI) 100861513
Atlas_Id 80227
Location 1p34.3  [Link to chromosome band 1p34]
Location_base_pair Starts at 35358824 and ends at 35366077 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ZMYM4-AS1   40624
Cards
Entrez_Gene (NCBI)ZMYM4-AS1  100861513  ZMYM4 antisense RNA 1
Aliases
GeneCards (Weizmann)ZMYM4-AS1
Ensembl hg19 (Hinxton)ENSG00000227409 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227409 [Gene_View]  chr1:35358824-35366077 [Contig_View]  ZMYM4-AS1 [Vega]
ICGC DataPortalENSG00000227409
TCGA cBioPortalZMYM4-AS1
AceView (NCBI)ZMYM4-AS1
Genatlas (Paris)ZMYM4-AS1
WikiGenes100861513
SOURCE (Princeton)ZMYM4-AS1
Genetics Home Reference (NIH)ZMYM4-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ZMYM4-AS1  -     chr1:35358824-35366077 -  1p34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZMYM4-AS1  -     1p34.3   [Description]    (hg19-Feb_2009)
EnsemblZMYM4-AS1 - 1p34.3 [CytoView hg19]  ZMYM4-AS1 - 1p34.3 [CytoView hg38]
Mapping of homologs : NCBIZMYM4-AS1 [Mapview hg19]  ZMYM4-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG187713 BG193369 BG208679
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZMYM4-AS1
Cluster EST : UnigeneHs.585397 [ NCBI ]
CGAP (NCI)Hs.585397
Alternative Splicing GalleryENSG00000227409
Gene ExpressionZMYM4-AS1 [ NCBI-GEO ]   ZMYM4-AS1 [ EBI - ARRAY_EXPRESS ]   ZMYM4-AS1 [ SEEK ]   ZMYM4-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZMYM4-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861513
GTEX Portal (Tissue expression)ZMYM4-AS1
Human Protein AtlasENSG00000227409-ZMYM4-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZMYM4-AS1
DMDM Disease mutations100861513
Blocks (Seattle)ZMYM4-AS1
Human Protein Atlas [tissue]ENSG00000227409-ZMYM4-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000227409
BioGRIDZMYM4-AS1
STRING (EMBL)ZMYM4-AS1
ZODIACZMYM4-AS1
Ontologies - Pathways
Huge Navigator ZMYM4-AS1 [HugePedia]
snp3D : Map Gene to Disease100861513
BioCentury BCIQZMYM4-AS1
ClinGenZMYM4-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861513
Clinical trialZMYM4-AS1
Miscellaneous
canSAR (ICR)ZMYM4-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZMYM4-AS1
EVEXZMYM4-AS1
GoPubMedZMYM4-AS1
iHOPZMYM4-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:03:43 CET 2017

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