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ZMYM6NB (ZMYM6 neighbor)

Identity

Other alias-
HGNC (Hugo) ZMYM6NB
LocusID (NCBI) 100506144
Atlas_Id 75978
Location 1p34.3  [Link to chromosome band 1p34]
Location_base_pair Starts at 35447127 and ends at 35450948 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZMYM6NB   40021
Cards
Entrez_Gene (NCBI)ZMYM6NB  100506144  ZMYM6 neighbor
Aliases
GeneCards (Weizmann)ZMYM6NB
Ensembl hg19 (Hinxton)ENSG00000243749 [Gene_View]  chr1:35447127-35450948 [Contig_View]  ZMYM6NB [Vega]
Ensembl hg38 (Hinxton)ENSG00000243749 [Gene_View]  chr1:35447127-35450948 [Contig_View]  ZMYM6NB [Vega]
ICGC DataPortalENSG00000243749
TCGA cBioPortalZMYM6NB
AceView (NCBI)ZMYM6NB
Genatlas (Paris)ZMYM6NB
WikiGenes100506144
SOURCE (Princeton)ZMYM6NB
Genetics Home Reference (NIH)ZMYM6NB
Genomic and cartography
GoldenPath hg19 (UCSC)ZMYM6NB  -     chr1:35447127-35450948 -  1p34.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZMYM6NB  -     1p34.3   [Description]    (hg38-Dec_2013)
EnsemblZMYM6NB - 1p34.3 [CytoView hg19]  ZMYM6NB - 1p34.3 [CytoView hg38]
Mapping of homologs : NCBIZMYM6NB [Mapview hg19]  ZMYM6NB [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA846430 AK129824 BC029439 BU076143 DB447268
RefSeq transcript (Entrez)NM_001195156
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)ZMYM6NB
Cluster EST : UnigeneHs.533986 [ NCBI ]
CGAP (NCI)Hs.533986
Alternative Splicing GalleryENSG00000243749
Gene ExpressionZMYM6NB [ NCBI-GEO ]   ZMYM6NB [ EBI - ARRAY_EXPRESS ]   ZMYM6NB [ SEEK ]   ZMYM6NB [ MEM ]
Gene Expression Viewer (FireBrowse)ZMYM6NB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506144
GTEX Portal (Tissue expression)ZMYM6NB
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCS4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCS4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCS4
Splice isoforms : SwissVarQ8NCS4
PhosPhoSitePlusQ8NCS4
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZMYM6NB
DMDM Disease mutations100506144
Blocks (Seattle)ZMYM6NB
SuperfamilyQ8NCS4
Human Protein AtlasENSG00000243749
Peptide AtlasQ8NCS4
IPIIPI00168438   
Protein Interaction databases
DIP (DOE-UCLA)Q8NCS4
IntAct (EBI)Q8NCS4
FunCoupENSG00000243749
BioGRIDZMYM6NB
STRING (EMBL)ZMYM6NB
ZODIACZMYM6NB
Ontologies - Pathways
QuickGOQ8NCS4
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkZMYM6NB
Atlas of Cancer Signalling NetworkZMYM6NB
Wikipedia pathwaysZMYM6NB
Orthology - Evolution
OrthoDB100506144
GeneTree (enSembl)ENSG00000243749
Phylogenetic Trees/Animal Genes : TreeFamZMYM6NB
HOVERGENQ8NCS4
HOGENOMQ8NCS4
Homologs : HomoloGeneZMYM6NB
Homology/Alignments : Family Browser (UCSC)ZMYM6NB
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZMYM6NB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZMYM6NB
dbVarZMYM6NB
ClinVarZMYM6NB
1000_GenomesZMYM6NB 
Exome Variant ServerZMYM6NB
ExAC (Exome Aggregation Consortium)ZMYM6NB (select the gene name)
Genetic variants : HAPMAP100506144
Genomic Variants (DGV)ZMYM6NB [DGVbeta]
DECIPHER (Syndromes)1:35447127-35450948  ENSG00000243749
CONAN: Copy Number AnalysisZMYM6NB 
Mutations
ICGC Data PortalZMYM6NB 
TCGA Data PortalZMYM6NB 
Broad Tumor PortalZMYM6NB
OASIS PortalZMYM6NB [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZMYM6NB
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZMYM6NB
DgiDB (Drug Gene Interaction Database)ZMYM6NB
DoCM (Curated mutations)ZMYM6NB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZMYM6NB (select a term)
intoGenZMYM6NB
Cancer3DZMYM6NB(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZMYM6NB
Genetic Testing Registry ZMYM6NB
NextProtQ8NCS4 [Medical]
TSGene100506144
GENETestsZMYM6NB
Huge Navigator ZMYM6NB [HugePedia]
snp3D : Map Gene to Disease100506144
BioCentury BCIQZMYM6NB
ClinGenZMYM6NB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506144
Clinical trialZMYM6NB
Miscellaneous
canSAR (ICR)ZMYM6NB (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZMYM6NB
EVEXZMYM6NB
GoPubMedZMYM6NB
iHOPZMYM6NB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:28 CET 2017

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