Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZNF101 (zinc finger protein 101)

Identity

Alias_nameszinc finger protein 101 (Y2)
Alias_symbol (synonym)HZF12
DKFZp570I0164
Other alias
HGNC (Hugo) ZNF101
LocusID (NCBI) 94039
Atlas_Id 75983
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 19778962 and ends at 19794315 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF101   12881
Cards
Entrez_Gene (NCBI)ZNF101  94039  zinc finger protein 101
AliasesHZF12
GeneCards (Weizmann)ZNF101
Ensembl hg19 (Hinxton)ENSG00000181896 [Gene_View]  chr19:19778962-19794315 [Contig_View]  ZNF101 [Vega]
Ensembl hg38 (Hinxton)ENSG00000181896 [Gene_View]  chr19:19778962-19794315 [Contig_View]  ZNF101 [Vega]
ICGC DataPortalENSG00000181896
TCGA cBioPortalZNF101
AceView (NCBI)ZNF101
Genatlas (Paris)ZNF101
WikiGenes94039
SOURCE (Princeton)ZNF101
Genetics Home Reference (NIH)ZNF101
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF101  -     chr19:19778962-19794315 +  19p13.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF101  -     19p13.11   [Description]    (hg38-Dec_2013)
EnsemblZNF101 - 19p13.11 [CytoView hg19]  ZNF101 - 19p13.11 [CytoView hg38]
Mapping of homologs : NCBIZNF101 [Mapview hg19]  ZNF101 [Mapview hg38]
OMIM603983   
Gene and transcription
Genbank (Entrez)AK097169 AK123904 AL096747 AY149174 BC011502
RefSeq transcript (Entrez)NM_001300949 NM_033204
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)ZNF101
Cluster EST : UnigeneHs.631642 [ NCBI ]
CGAP (NCI)Hs.631642
Alternative Splicing GalleryENSG00000181896
Gene ExpressionZNF101 [ NCBI-GEO ]   ZNF101 [ EBI - ARRAY_EXPRESS ]   ZNF101 [ SEEK ]   ZNF101 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF101 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)94039
GTEX Portal (Tissue expression)ZNF101
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZC7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IZC7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IZC7
Splice isoforms : SwissVarQ8IZC7
PhosPhoSitePlusQ8IZC7
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF101
DMDM Disease mutations94039
Blocks (Seattle)ZNF101
SuperfamilyQ8IZC7
Human Protein AtlasENSG00000181896
Peptide AtlasQ8IZC7
HPRD11963
IPIIPI00217973   IPI01011622   IPI00604638   
Protein Interaction databases
DIP (DOE-UCLA)Q8IZC7
IntAct (EBI)Q8IZC7
FunCoupENSG00000181896
BioGRIDZNF101
STRING (EMBL)ZNF101
ZODIACZNF101
Ontologies - Pathways
QuickGOQ8IZC7
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF101
Atlas of Cancer Signalling NetworkZNF101
Wikipedia pathwaysZNF101
Orthology - Evolution
OrthoDB94039
GeneTree (enSembl)ENSG00000181896
Phylogenetic Trees/Animal Genes : TreeFamZNF101
HOVERGENQ8IZC7
HOGENOMQ8IZC7
Homologs : HomoloGeneZNF101
Homology/Alignments : Family Browser (UCSC)ZNF101
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF101 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF101
dbVarZNF101
ClinVarZNF101
1000_GenomesZNF101 
Exome Variant ServerZNF101
ExAC (Exome Aggregation Consortium)ZNF101 (select the gene name)
Genetic variants : HAPMAP94039
Genomic Variants (DGV)ZNF101 [DGVbeta]
DECIPHER (Syndromes)19:19778962-19794315  ENSG00000181896
CONAN: Copy Number AnalysisZNF101 
Mutations
ICGC Data PortalZNF101 
TCGA Data PortalZNF101 
Broad Tumor PortalZNF101
OASIS PortalZNF101 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF101  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF101
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF101
DgiDB (Drug Gene Interaction Database)ZNF101
DoCM (Curated mutations)ZNF101 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF101 (select a term)
intoGenZNF101
Cancer3DZNF101(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603983   
Orphanet
MedgenZNF101
Genetic Testing Registry ZNF101
NextProtQ8IZC7 [Medical]
TSGene94039
GENETestsZNF101
Huge Navigator ZNF101 [HugePedia]
snp3D : Map Gene to Disease94039
BioCentury BCIQZNF101
ClinGenZNF101
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD94039
Chemical/Pharm GKB GenePA37470
Clinical trialZNF101
Miscellaneous
canSAR (ICR)ZNF101 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF101
EVEXZNF101
GoPubMedZNF101
iHOPZNF101
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:52:29 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.