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ZNF112 (zinc finger protein 112)

Identity

Alias_namesZFP112
ZNF228
zinc finger protein 112 homolog (mouse)
zinc finger protein 228
Other alias
HGNC (Hugo) ZNF112
LocusID (NCBI) 7771
Atlas_Id 75986
Location 19q13.31  [Link to chromosome band 19q13]
Location_base_pair Starts at 44326553 and ends at 44356704 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GPR39 (2q21.2) / ZNF112 (19q13.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF112   12892
Cards
Entrez_Gene (NCBI)ZNF112  7771  zinc finger protein 112
AliasesZFP112; ZNF228
GeneCards (Weizmann)ZNF112
Ensembl hg19 (Hinxton)ENSG00000062370 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000062370 [Gene_View]  chr19:44326553-44356704 [Contig_View]  ZNF112 [Vega]
ICGC DataPortalENSG00000062370
TCGA cBioPortalZNF112
AceView (NCBI)ZNF112
Genatlas (Paris)ZNF112
WikiGenes7771
SOURCE (Princeton)ZNF112
Genetics Home Reference (NIH)ZNF112
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF112  -     chr19:44326553-44356704 -  19q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF112  -     19q13.31   [Description]    (hg19-Feb_2009)
EnsemblZNF112 - 19q13.31 [CytoView hg19]  ZNF112 - 19q13.31 [CytoView hg38]
Mapping of homologs : NCBIZNF112 [Mapview hg19]  ZNF112 [Mapview hg38]
OMIM603994   
Gene and transcription
Genbank (Entrez)AA449338 AA913353 AF198358 AK023099 AK026230
RefSeq transcript (Entrez)NM_001083335 NM_001348281 NM_001348282 NM_001348283 NM_001348284 NM_001348285 NM_013380
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF112
Cluster EST : UnigeneHs.48589 [ NCBI ]
CGAP (NCI)Hs.48589
Alternative Splicing GalleryENSG00000062370
Gene ExpressionZNF112 [ NCBI-GEO ]   ZNF112 [ EBI - ARRAY_EXPRESS ]   ZNF112 [ SEEK ]   ZNF112 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF112 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7771
GTEX Portal (Tissue expression)ZNF112
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UJU3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UJU3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UJU3
Splice isoforms : SwissVarQ9UJU3
PhosPhoSitePlusQ9UJU3
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF112
DMDM Disease mutations7771
Blocks (Seattle)ZNF112
SuperfamilyQ9UJU3
Human Protein AtlasENSG00000062370
Peptide AtlasQ9UJU3
HPRD15753
IPIIPI00007157   IPI00844582   
Protein Interaction databases
DIP (DOE-UCLA)Q9UJU3
IntAct (EBI)Q9UJU3
FunCoupENSG00000062370
BioGRIDZNF112
STRING (EMBL)ZNF112
ZODIACZNF112
Ontologies - Pathways
QuickGOQ9UJU3
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF112
Atlas of Cancer Signalling NetworkZNF112
Wikipedia pathwaysZNF112
Orthology - Evolution
OrthoDB7771
GeneTree (enSembl)ENSG00000062370
Phylogenetic Trees/Animal Genes : TreeFamZNF112
HOVERGENQ9UJU3
HOGENOMQ9UJU3
Homologs : HomoloGeneZNF112
Homology/Alignments : Family Browser (UCSC)ZNF112
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF112 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF112
dbVarZNF112
ClinVarZNF112
1000_GenomesZNF112 
Exome Variant ServerZNF112
ExAC (Exome Aggregation Consortium)ZNF112 (select the gene name)
Genetic variants : HAPMAP7771
Genomic Variants (DGV)ZNF112 [DGVbeta]
DECIPHERZNF112 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF112 
Mutations
ICGC Data PortalZNF112 
TCGA Data PortalZNF112 
Broad Tumor PortalZNF112
OASIS PortalZNF112 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF112
BioMutasearch ZNF112
DgiDB (Drug Gene Interaction Database)ZNF112
DoCM (Curated mutations)ZNF112 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF112 (select a term)
intoGenZNF112
Cancer3DZNF112(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603994   
Orphanet
MedgenZNF112
Genetic Testing Registry ZNF112
NextProtQ9UJU3 [Medical]
TSGene7771
GENETestsZNF112
Target ValidationZNF112
Huge Navigator ZNF112 [HugePedia]
snp3D : Map Gene to Disease7771
BioCentury BCIQZNF112
ClinGenZNF112
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7771
Chemical/Pharm GKB GenePA166048945
Clinical trialZNF112
Miscellaneous
canSAR (ICR)ZNF112 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF112
EVEXZNF112
GoPubMedZNF112
iHOPZNF112
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:52 CEST 2017

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