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ZNF114 (zinc finger protein 114)

Identity

Alias_symbol (synonym)MGC17986
Other alias-
HGNC (Hugo) ZNF114
LocusID (NCBI) 163071
Atlas_Id 75987
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 48270903 and ends at 48287608 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF114   12894
Cards
Entrez_Gene (NCBI)ZNF114  163071  zinc finger protein 114
Aliases
GeneCards (Weizmann)ZNF114
Ensembl hg19 (Hinxton)ENSG00000178150 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178150 [Gene_View]  chr19:48270903-48287608 [Contig_View]  ZNF114 [Vega]
ICGC DataPortalENSG00000178150
TCGA cBioPortalZNF114
AceView (NCBI)ZNF114
Genatlas (Paris)ZNF114
WikiGenes163071
SOURCE (Princeton)ZNF114
Genetics Home Reference (NIH)ZNF114
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF114  -     chr19:48270903-48287608 +  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF114  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblZNF114 - 19q13.33 [CytoView hg19]  ZNF114 - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBIZNF114 [Mapview hg19]  ZNF114 [Mapview hg38]
OMIM603996   
Gene and transcription
Genbank (Entrez)AK075062 AK291575 BC014935 BC016811 BC034032
RefSeq transcript (Entrez)NM_001301062 NM_001331097 NM_001331098 NM_153608
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF114
Cluster EST : UnigeneHs.511883 [ NCBI ]
CGAP (NCI)Hs.511883
Alternative Splicing GalleryENSG00000178150
Gene ExpressionZNF114 [ NCBI-GEO ]   ZNF114 [ EBI - ARRAY_EXPRESS ]   ZNF114 [ SEEK ]   ZNF114 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF114 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)163071
GTEX Portal (Tissue expression)ZNF114
Human Protein AtlasENSG00000178150-ZNF114 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NC26   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NC26  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NC26
Splice isoforms : SwissVarQ8NC26
PhosPhoSitePlusQ8NC26
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF114
DMDM Disease mutations163071
Blocks (Seattle)ZNF114
SuperfamilyQ8NC26
Human Protein Atlas [tissue]ENSG00000178150-ZNF114 [tissue]
Peptide AtlasQ8NC26
HPRD14463
IPIIPI00168314   IPI00745243   
Protein Interaction databases
DIP (DOE-UCLA)Q8NC26
IntAct (EBI)Q8NC26
FunCoupENSG00000178150
BioGRIDZNF114
STRING (EMBL)ZNF114
ZODIACZNF114
Ontologies - Pathways
QuickGOQ8NC26
Ontology : AmiGOmolecular_function  DNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  biological_process  identical protein binding  metal ion binding  extracellular exosome  
Ontology : EGO-EBImolecular_function  DNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  biological_process  identical protein binding  metal ion binding  extracellular exosome  
NDEx NetworkZNF114
Atlas of Cancer Signalling NetworkZNF114
Wikipedia pathwaysZNF114
Orthology - Evolution
OrthoDB163071
GeneTree (enSembl)ENSG00000178150
Phylogenetic Trees/Animal Genes : TreeFamZNF114
HOVERGENQ8NC26
HOGENOMQ8NC26
Homologs : HomoloGeneZNF114
Homology/Alignments : Family Browser (UCSC)ZNF114
Gene fusions - Rearrangements
Fusion: Tumor Portal ZNF114
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF114 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF114
dbVarZNF114
ClinVarZNF114
1000_GenomesZNF114 
Exome Variant ServerZNF114
ExAC (Exome Aggregation Consortium)ENSG00000178150
GNOMAD BrowserENSG00000178150
Genetic variants : HAPMAP163071
Genomic Variants (DGV)ZNF114 [DGVbeta]
DECIPHERZNF114 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF114 
Mutations
ICGC Data PortalZNF114 
TCGA Data PortalZNF114 
Broad Tumor PortalZNF114
OASIS PortalZNF114 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF114  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF114
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF114
DgiDB (Drug Gene Interaction Database)ZNF114
DoCM (Curated mutations)ZNF114 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF114 (select a term)
intoGenZNF114
Cancer3DZNF114(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603996   
Orphanet
MedgenZNF114
Genetic Testing Registry ZNF114
NextProtQ8NC26 [Medical]
TSGene163071
GENETestsZNF114
Target ValidationZNF114
Huge Navigator ZNF114 [HugePedia]
snp3D : Map Gene to Disease163071
BioCentury BCIQZNF114
ClinGenZNF114
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD163071
Chemical/Pharm GKB GenePA37483
Clinical trialZNF114
Miscellaneous
canSAR (ICR)ZNF114 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF114
EVEXZNF114
GoPubMedZNF114
iHOPZNF114
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:36:36 CET 2017

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