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ZNF117 (zinc finger protein 117)

Identity

Alias_nameszinc finger protein 117 (HPF9)
Alias_symbol (synonym)HPF9
H-plk
Other alias
HGNC (Hugo) ZNF117
LocusID (NCBI) 51351
Atlas_Id 75988
Location 7q11.21  [Link to chromosome band 7q11]
Location_base_pair Starts at 64434830 and ends at 64451414 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF117   12897
Cards
Entrez_Gene (NCBI)ZNF117  51351  zinc finger protein 117
AliasesH-plk; HPF9
GeneCards (Weizmann)ZNF117
Ensembl hg19 (Hinxton)ENSG00000152926 [Gene_View]  chr7:64434830-64451414 [Contig_View]  ZNF117 [Vega]
Ensembl hg38 (Hinxton)ENSG00000152926 [Gene_View]  chr7:64434830-64451414 [Contig_View]  ZNF117 [Vega]
ICGC DataPortalENSG00000152926
TCGA cBioPortalZNF117
AceView (NCBI)ZNF117
Genatlas (Paris)ZNF117
WikiGenes51351
SOURCE (Princeton)ZNF117
Genetics Home Reference (NIH)ZNF117
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF117  -     chr7:64434830-64451414 -  7q11.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF117  -     7q11.21   [Description]    (hg38-Dec_2013)
EnsemblZNF117 - 7q11.21 [CytoView hg19]  ZNF117 - 7q11.21 [CytoView hg38]
Mapping of homologs : NCBIZNF117 [Mapview hg19]  ZNF117 [Mapview hg38]
OMIM194624   
Gene and transcription
Genbank (Entrez)AF075025 BC034021 BC156436 BC172492 M27879
RefSeq transcript (Entrez)NM_015852
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)ZNF117
Cluster EST : UnigeneHs.250693 [ NCBI ]
CGAP (NCI)Hs.250693
Alternative Splicing GalleryENSG00000152926
Gene ExpressionZNF117 [ NCBI-GEO ]   ZNF117 [ EBI - ARRAY_EXPRESS ]   ZNF117 [ SEEK ]   ZNF117 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF117 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51351
GTEX Portal (Tissue expression)ZNF117
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ03924   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ03924  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ03924
Splice isoforms : SwissVarQ03924
PhosPhoSitePlusQ03924
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF117
DMDM Disease mutations51351
Blocks (Seattle)ZNF117
SuperfamilyQ03924
Human Protein AtlasENSG00000152926
Peptide AtlasQ03924
HPRD08937
IPIIPI00026249   IPI00956130   
Protein Interaction databases
DIP (DOE-UCLA)Q03924
IntAct (EBI)Q03924
FunCoupENSG00000152926
BioGRIDZNF117
STRING (EMBL)ZNF117
ZODIACZNF117
Ontologies - Pathways
QuickGOQ03924
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  
NDEx NetworkZNF117
Atlas of Cancer Signalling NetworkZNF117
Wikipedia pathwaysZNF117
Orthology - Evolution
OrthoDB51351
GeneTree (enSembl)ENSG00000152926
Phylogenetic Trees/Animal Genes : TreeFamZNF117
HOVERGENQ03924
HOGENOMQ03924
Homologs : HomoloGeneZNF117
Homology/Alignments : Family Browser (UCSC)ZNF117
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF117 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF117
dbVarZNF117
ClinVarZNF117
1000_GenomesZNF117 
Exome Variant ServerZNF117
ExAC (Exome Aggregation Consortium)ZNF117 (select the gene name)
Genetic variants : HAPMAP51351
Genomic Variants (DGV)ZNF117 [DGVbeta]
DECIPHER (Syndromes)7:64434830-64451414  ENSG00000152926
CONAN: Copy Number AnalysisZNF117 
Mutations
ICGC Data PortalZNF117 
TCGA Data PortalZNF117 
Broad Tumor PortalZNF117
OASIS PortalZNF117 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF117  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF117
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF117
DgiDB (Drug Gene Interaction Database)ZNF117
DoCM (Curated mutations)ZNF117 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF117 (select a term)
intoGenZNF117
Cancer3DZNF117(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194624   
Orphanet
MedgenZNF117
Genetic Testing Registry ZNF117
NextProtQ03924 [Medical]
TSGene51351
GENETestsZNF117
Huge Navigator ZNF117 [HugePedia]
snp3D : Map Gene to Disease51351
BioCentury BCIQZNF117
ClinGenZNF117
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51351
Chemical/Pharm GKB GenePA37486
Clinical trialZNF117
Miscellaneous
canSAR (ICR)ZNF117 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF117
EVEXZNF117
GoPubMedZNF117
iHOPZNF117
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:30 CET 2017

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