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ZNF121 (zinc finger protein 121)

Identity

Alias_namesD19S204
zinc finger protein 121 (clone ZHC32)
Alias_symbol (synonym)ZHC32
ZNF20
Other alias
HGNC (Hugo) ZNF121
LocusID (NCBI) 7675
Atlas_Id 75990
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 9676404 and ends at 9695209 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ZNF121 (19p13.2) / OLFM2 (19p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF121   12904
Cards
Entrez_Gene (NCBI)ZNF121  7675  zinc finger protein 121
AliasesD19S204; ZHC32; ZNF20
GeneCards (Weizmann)ZNF121
Ensembl hg19 (Hinxton)ENSG00000197961 [Gene_View]  chr19:9676404-9695209 [Contig_View]  ZNF121 [Vega]
Ensembl hg38 (Hinxton)ENSG00000197961 [Gene_View]  chr19:9676404-9695209 [Contig_View]  ZNF121 [Vega]
ICGC DataPortalENSG00000197961
TCGA cBioPortalZNF121
AceView (NCBI)ZNF121
Genatlas (Paris)ZNF121
WikiGenes7675
SOURCE (Princeton)ZNF121
Genetics Home Reference (NIH)ZNF121
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF121  -     chr19:9676404-9695209 -  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF121  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblZNF121 - 19p13.2 [CytoView hg19]  ZNF121 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF121 [Mapview hg19]  ZNF121 [Mapview hg38]
OMIM194628   
Gene and transcription
Genbank (Entrez)AA096354 AK297919 AU253046 AW949690 BC172258
RefSeq transcript (Entrez)NM_001008727 NM_001308269
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)ZNF121
Cluster EST : UnigeneHs.501537 [ NCBI ]
CGAP (NCI)Hs.501537
Alternative Splicing GalleryENSG00000197961
Gene ExpressionZNF121 [ NCBI-GEO ]   ZNF121 [ EBI - ARRAY_EXPRESS ]   ZNF121 [ SEEK ]   ZNF121 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF121 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7675
GTEX Portal (Tissue expression)ZNF121
Protein : pattern, domain, 3D structure
UniProt/SwissProtP58317   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP58317  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP58317
Splice isoforms : SwissVarP58317
PhosPhoSitePlusP58317
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF121
DMDM Disease mutations7675
Blocks (Seattle)ZNF121
SuperfamilyP58317
Human Protein AtlasENSG00000197961
Peptide AtlasP58317
HPRD15952
IPIIPI00033488   IPI01013222   
Protein Interaction databases
DIP (DOE-UCLA)P58317
IntAct (EBI)P58317
FunCoupENSG00000197961
BioGRIDZNF121
STRING (EMBL)ZNF121
ZODIACZNF121
Ontologies - Pathways
QuickGOP58317
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF121
Atlas of Cancer Signalling NetworkZNF121
Wikipedia pathwaysZNF121
Orthology - Evolution
OrthoDB7675
GeneTree (enSembl)ENSG00000197961
Phylogenetic Trees/Animal Genes : TreeFamZNF121
HOVERGENP58317
HOGENOMP58317
Homologs : HomoloGeneZNF121
Homology/Alignments : Family Browser (UCSC)ZNF121
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF121 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF121
dbVarZNF121
ClinVarZNF121
1000_GenomesZNF121 
Exome Variant ServerZNF121
ExAC (Exome Aggregation Consortium)ZNF121 (select the gene name)
Genetic variants : HAPMAP7675
Genomic Variants (DGV)ZNF121 [DGVbeta]
DECIPHER (Syndromes)19:9676404-9695209  ENSG00000197961
CONAN: Copy Number AnalysisZNF121 
Mutations
ICGC Data PortalZNF121 
TCGA Data PortalZNF121 
Broad Tumor PortalZNF121
OASIS PortalZNF121 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF121  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF121
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF121
DgiDB (Drug Gene Interaction Database)ZNF121
DoCM (Curated mutations)ZNF121 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF121 (select a term)
intoGenZNF121
Cancer3DZNF121(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194628   
Orphanet
MedgenZNF121
Genetic Testing Registry ZNF121
NextProtP58317 [Medical]
TSGene7675
GENETestsZNF121
Huge Navigator ZNF121 [HugePedia]
snp3D : Map Gene to Disease7675
BioCentury BCIQZNF121
ClinGenZNF121
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7675
Chemical/Pharm GKB GenePA37493
Clinical trialZNF121
Miscellaneous
canSAR (ICR)ZNF121 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF121
EVEXZNF121
GoPubMedZNF121
iHOPZNF121
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:30 CET 2017

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