Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZNF133 (zinc finger protein 133)

Identity

Alias_namesZNF150
zinc finger protein 150 (pHZ-66)
zinc finger protein 133 (clone pHZ-13)
Alias_symbol (synonym)pHZ-13
pHZ-66
Other alias
HGNC (Hugo) ZNF133
LocusID (NCBI) 7692
Atlas_Id 75992
Location 20p11.23  [Link to chromosome band 20p11]
Location_base_pair Starts at 18268927 and ends at 18297640 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BMPR2 (2q33.1) / ZNF133 (20p11.23)SEC16A (9q34.3) / ZNF133 (20p11.23)ZNF133 (20p11.23) / BMPR2 (2q33.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF133   12917
Cards
Entrez_Gene (NCBI)ZNF133  7692  zinc finger protein 133
AliasesZNF150; pHZ-13; pHZ-66
GeneCards (Weizmann)ZNF133
Ensembl hg19 (Hinxton)ENSG00000125846 [Gene_View]  chr20:18268927-18297640 [Contig_View]  ZNF133 [Vega]
Ensembl hg38 (Hinxton)ENSG00000125846 [Gene_View]  chr20:18268927-18297640 [Contig_View]  ZNF133 [Vega]
ICGC DataPortalENSG00000125846
TCGA cBioPortalZNF133
AceView (NCBI)ZNF133
Genatlas (Paris)ZNF133
WikiGenes7692
SOURCE (Princeton)ZNF133
Genetics Home Reference (NIH)ZNF133
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF133  -     chr20:18268927-18297640 +  20p11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF133  -     20p11.23   [Description]    (hg38-Dec_2013)
EnsemblZNF133 - 20p11.23 [CytoView hg19]  ZNF133 - 20p11.23 [CytoView hg38]
Mapping of homologs : NCBIZNF133 [Mapview hg19]  ZNF133 [Mapview hg38]
OMIM604075   
Gene and transcription
Genbank (Entrez)AK123005 AK291389 AK294263 AK295273 AK295513
RefSeq transcript (Entrez)NM_001083330 NM_001282995 NM_001282996 NM_001282997 NM_001282998 NM_001282999 NM_001283000 NM_001283001 NM_001283002 NM_001283003 NM_001283004 NM_001283005 NM_001283006 NM_001283007 NM_001283008 NM_003434
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011387 NW_004929416
Consensus coding sequences : CCDS (NCBI)ZNF133
Cluster EST : UnigeneHs.472221 [ NCBI ]
CGAP (NCI)Hs.472221
Alternative Splicing GalleryENSG00000125846
Gene ExpressionZNF133 [ NCBI-GEO ]   ZNF133 [ EBI - ARRAY_EXPRESS ]   ZNF133 [ SEEK ]   ZNF133 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF133 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7692
GTEX Portal (Tissue expression)ZNF133
Protein : pattern, domain, 3D structure
UniProt/SwissProtP52736   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP52736  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP52736
Splice isoforms : SwissVarP52736
PhosPhoSitePlusP52736
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF133
DMDM Disease mutations7692
Blocks (Seattle)ZNF133
SuperfamilyP52736
Human Protein AtlasENSG00000125846
Peptide AtlasP52736
HPRD04964
IPIIPI00942217   IPI00797700   IPI00004978   IPI01009523   IPI01013934   IPI00645680   IPI00643478   IPI00604748   
Protein Interaction databases
DIP (DOE-UCLA)P52736
IntAct (EBI)P52736
FunCoupENSG00000125846
BioGRIDZNF133
STRING (EMBL)ZNF133
ZODIACZNF133
Ontologies - Pathways
QuickGOP52736
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF133
Atlas of Cancer Signalling NetworkZNF133
Wikipedia pathwaysZNF133
Orthology - Evolution
OrthoDB7692
GeneTree (enSembl)ENSG00000125846
Phylogenetic Trees/Animal Genes : TreeFamZNF133
HOVERGENP52736
HOGENOMP52736
Homologs : HomoloGeneZNF133
Homology/Alignments : Family Browser (UCSC)ZNF133
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF133 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF133
dbVarZNF133
ClinVarZNF133
1000_GenomesZNF133 
Exome Variant ServerZNF133
ExAC (Exome Aggregation Consortium)ZNF133 (select the gene name)
Genetic variants : HAPMAP7692
Genomic Variants (DGV)ZNF133 [DGVbeta]
DECIPHER (Syndromes)20:18268927-18297640  ENSG00000125846
CONAN: Copy Number AnalysisZNF133 
Mutations
ICGC Data PortalZNF133 
TCGA Data PortalZNF133 
Broad Tumor PortalZNF133
OASIS PortalZNF133 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF133  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF133
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF133
DgiDB (Drug Gene Interaction Database)ZNF133
DoCM (Curated mutations)ZNF133 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF133 (select a term)
intoGenZNF133
Cancer3DZNF133(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604075   
Orphanet
MedgenZNF133
Genetic Testing Registry ZNF133
NextProtP52736 [Medical]
TSGene7692
GENETestsZNF133
Huge Navigator ZNF133 [HugePedia]
snp3D : Map Gene to Disease7692
BioCentury BCIQZNF133
ClinGenZNF133
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7692
Chemical/Pharm GKB GenePA134900961
Clinical trialZNF133
Miscellaneous
canSAR (ICR)ZNF133 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF133
EVEXZNF133
GoPubMedZNF133
iHOPZNF133
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:30 CET 2017

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