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ZNF135 (zinc finger protein 135)

Identity

Alias_namesZNF61
ZNF78L1
zinc finger protein 61
zinc finger protein 135 (clone pHZ-17)
Alias_symbol (synonym)pHZ-17
Other aliaspT3
HGNC (Hugo) ZNF135
LocusID (NCBI) 7694
Atlas_Id 75993
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 58059239 and ends at 58063936 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF135   12919
Cards
Entrez_Gene (NCBI)ZNF135  7694  zinc finger protein 135
AliasesZNF61; ZNF78L1; pHZ-17; pT3
GeneCards (Weizmann)ZNF135
Ensembl hg19 (Hinxton)ENSG00000176293 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176293 [Gene_View]  chr19:58059239-58063936 [Contig_View]  ZNF135 [Vega]
ICGC DataPortalENSG00000176293
TCGA cBioPortalZNF135
AceView (NCBI)ZNF135
Genatlas (Paris)ZNF135
WikiGenes7694
SOURCE (Princeton)ZNF135
Genetics Home Reference (NIH)ZNF135
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF135  -     chr19:58059239-58063936 +  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF135  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblZNF135 - 19q13.43 [CytoView hg19]  ZNF135 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIZNF135 [Mapview hg19]  ZNF135 [Mapview hg38]
OMIM604077   
Gene and transcription
Genbank (Entrez)AK094202 AK095796 AK098011 AK295110 AK297226
RefSeq transcript (Entrez)NM_001164527 NM_001164529 NM_001164530 NM_001289401 NM_001289402 NM_003436 NM_007134
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF135
Cluster EST : UnigeneHs.85863 [ NCBI ]
CGAP (NCI)Hs.85863
Alternative Splicing GalleryENSG00000176293
Gene ExpressionZNF135 [ NCBI-GEO ]   ZNF135 [ EBI - ARRAY_EXPRESS ]   ZNF135 [ SEEK ]   ZNF135 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF135 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7694
GTEX Portal (Tissue expression)ZNF135
Protein : pattern, domain, 3D structure
UniProt/SwissProtP52742   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP52742  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP52742
Splice isoforms : SwissVarP52742
PhosPhoSitePlusP52742
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF135
DMDM Disease mutations7694
Blocks (Seattle)ZNF135
SuperfamilyP52742
Human Protein AtlasENSG00000176293
Peptide AtlasP52742
HPRD07242
IPIIPI00395473   IPI00944454   IPI00944661   IPI00944624   IPI01014109   IPI01013651   IPI00645548   
Protein Interaction databases
DIP (DOE-UCLA)P52742
IntAct (EBI)P52742
FunCoupENSG00000176293
BioGRIDZNF135
STRING (EMBL)ZNF135
ZODIACZNF135
Ontologies - Pathways
QuickGOP52742
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  regulation of transcription, DNA-templated  cytoskeleton organization  regulation of cell morphogenesis  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  regulation of transcription, DNA-templated  cytoskeleton organization  regulation of cell morphogenesis  metal ion binding  
NDEx NetworkZNF135
Atlas of Cancer Signalling NetworkZNF135
Wikipedia pathwaysZNF135
Orthology - Evolution
OrthoDB7694
GeneTree (enSembl)ENSG00000176293
Phylogenetic Trees/Animal Genes : TreeFamZNF135
HOVERGENP52742
HOGENOMP52742
Homologs : HomoloGeneZNF135
Homology/Alignments : Family Browser (UCSC)ZNF135
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF135 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF135
dbVarZNF135
ClinVarZNF135
1000_GenomesZNF135 
Exome Variant ServerZNF135
ExAC (Exome Aggregation Consortium)ZNF135 (select the gene name)
Genetic variants : HAPMAP7694
Genomic Variants (DGV)ZNF135 [DGVbeta]
DECIPHERZNF135 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF135 
Mutations
ICGC Data PortalZNF135 
TCGA Data PortalZNF135 
Broad Tumor PortalZNF135
OASIS PortalZNF135 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF135  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF135
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF135
DgiDB (Drug Gene Interaction Database)ZNF135
DoCM (Curated mutations)ZNF135 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF135 (select a term)
intoGenZNF135
Cancer3DZNF135(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604077   
Orphanet
MedgenZNF135
Genetic Testing Registry ZNF135
NextProtP52742 [Medical]
TSGene7694
GENETestsZNF135
Target ValidationZNF135
Huge Navigator ZNF135 [HugePedia]
snp3D : Map Gene to Disease7694
BioCentury BCIQZNF135
ClinGenZNF135
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7694
Chemical/Pharm GKB GenePA37507
Clinical trialZNF135
Miscellaneous
canSAR (ICR)ZNF135 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF135
EVEXZNF135
GoPubMedZNF135
iHOPZNF135
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:24 CEST 2017

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