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ZNF136 (zinc finger protein 136)

Identity

Alias_nameszinc finger protein 136 (clone pHZ-20)
Alias_symbol (synonym)pHZ-20
Other alias
HGNC (Hugo) ZNF136
LocusID (NCBI) 7695
Atlas_Id 75994
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 12163047 and ends at 12189881 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF136   12920
Cards
Entrez_Gene (NCBI)ZNF136  7695  zinc finger protein 136
AliasespHZ-20
GeneCards (Weizmann)ZNF136
Ensembl hg19 (Hinxton)ENSG00000196646 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196646 [Gene_View]  chr19:12163047-12189881 [Contig_View]  ZNF136 [Vega]
ICGC DataPortalENSG00000196646
TCGA cBioPortalZNF136
AceView (NCBI)ZNF136
Genatlas (Paris)ZNF136
WikiGenes7695
SOURCE (Princeton)ZNF136
Genetics Home Reference (NIH)ZNF136
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF136  -     chr19:12163047-12189881 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF136  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblZNF136 - 19p13.2 [CytoView hg19]  ZNF136 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF136 [Mapview hg19]  ZNF136 [Mapview hg38]
OMIM604078   
Gene and transcription
Genbank (Entrez)AK123008 AK291242 AK299601 AL537987 AY500356
RefSeq transcript (Entrez)NM_001348013 NM_001348014 NM_003437
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF136
Cluster EST : UnigeneHs.627287 [ NCBI ]
CGAP (NCI)Hs.627287
Alternative Splicing GalleryENSG00000196646
Gene ExpressionZNF136 [ NCBI-GEO ]   ZNF136 [ EBI - ARRAY_EXPRESS ]   ZNF136 [ SEEK ]   ZNF136 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF136 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7695
GTEX Portal (Tissue expression)ZNF136
Human Protein AtlasENSG00000196646-ZNF136 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP52737   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP52737  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP52737
Splice isoforms : SwissVarP52737
PhosPhoSitePlusP52737
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF136
DMDM Disease mutations7695
Blocks (Seattle)ZNF136
SuperfamilyP52737
Human Protein Atlas [tissue]ENSG00000196646-ZNF136 [tissue]
Peptide AtlasP52737
HPRD04965
IPIIPI00473074   IPI00645076   IPI00925107   IPI00924894   
Protein Interaction databases
DIP (DOE-UCLA)P52737
IntAct (EBI)P52737
FunCoupENSG00000196646
BioGRIDZNF136
STRING (EMBL)ZNF136
ZODIACZNF136
Ontologies - Pathways
QuickGOP52737
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription corepressor activity  protein binding  nucleus  transcription from RNA polymerase II promoter  metal ion binding  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription corepressor activity  protein binding  nucleus  transcription from RNA polymerase II promoter  metal ion binding  
NDEx NetworkZNF136
Atlas of Cancer Signalling NetworkZNF136
Wikipedia pathwaysZNF136
Orthology - Evolution
OrthoDB7695
GeneTree (enSembl)ENSG00000196646
Phylogenetic Trees/Animal Genes : TreeFamZNF136
HOVERGENP52737
HOGENOMP52737
Homologs : HomoloGeneZNF136
Homology/Alignments : Family Browser (UCSC)ZNF136
Gene fusions - Rearrangements
Fusion: Tumor Portal ZNF136
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF136 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF136
dbVarZNF136
ClinVarZNF136
1000_GenomesZNF136 
Exome Variant ServerZNF136
ExAC (Exome Aggregation Consortium)ENSG00000196646
GNOMAD BrowserENSG00000196646
Genetic variants : HAPMAP7695
Genomic Variants (DGV)ZNF136 [DGVbeta]
DECIPHERZNF136 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF136 
Mutations
ICGC Data PortalZNF136 
TCGA Data PortalZNF136 
Broad Tumor PortalZNF136
OASIS PortalZNF136 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF136  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF136
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF136
DgiDB (Drug Gene Interaction Database)ZNF136
DoCM (Curated mutations)ZNF136 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF136 (select a term)
intoGenZNF136
Cancer3DZNF136(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604078   
Orphanet
MedgenZNF136
Genetic Testing Registry ZNF136
NextProtP52737 [Medical]
TSGene7695
GENETestsZNF136
Target ValidationZNF136
Huge Navigator ZNF136 [HugePedia]
snp3D : Map Gene to Disease7695
BioCentury BCIQZNF136
ClinGenZNF136
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7695
Chemical/Pharm GKB GenePA37508
Clinical trialZNF136
Miscellaneous
canSAR (ICR)ZNF136 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF136
EVEXZNF136
GoPubMedZNF136
iHOPZNF136
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:36:37 CET 2017

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