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ZNF14 (zinc finger protein 14)

Identity

Alias_nameszinc finger protein 14 (KOX 6)
Alias_symbol (synonym)KOX6
GIOT-4
Other alias
HGNC (Hugo) ZNF14
LocusID (NCBI) 7561
Atlas_Id 75997
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 19710472 and ends at 19733112 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ATP13A1 (19p13.11) / ZNF14 (19p13.11)ZNF14 (19p13.11) / NARS (18q21.31)ZNF14 (19p13.11) / RGL3 (19p13.2)
ZNF14 (19p13.11) / STAT5A (17q21.2)ZNF14 RGL3ZNF14 STAT5A

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF14   12924
Cards
Entrez_Gene (NCBI)ZNF14  7561  zinc finger protein 14
AliasesGIOT-4; KOX6
GeneCards (Weizmann)ZNF14
Ensembl hg19 (Hinxton)ENSG00000105708 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105708 [Gene_View]  chr19:19710472-19733112 [Contig_View]  ZNF14 [Vega]
ICGC DataPortalENSG00000105708
TCGA cBioPortalZNF14
AceView (NCBI)ZNF14
Genatlas (Paris)ZNF14
WikiGenes7561
SOURCE (Princeton)ZNF14
Genetics Home Reference (NIH)ZNF14
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF14  -     chr19:19710472-19733112 -  19p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF14  -     19p13.11   [Description]    (hg19-Feb_2009)
EnsemblZNF14 - 19p13.11 [CytoView hg19]  ZNF14 - 19p13.11 [CytoView hg38]
Mapping of homologs : NCBIZNF14 [Mapview hg19]  ZNF14 [Mapview hg38]
OMIM194556   
Gene and transcription
Genbank (Entrez)AA286756 AB021644 AK074832 AV726241 AW675436
RefSeq transcript (Entrez)NM_021030
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF14
Cluster EST : UnigeneHs.659932 [ NCBI ]
CGAP (NCI)Hs.659932
Alternative Splicing GalleryENSG00000105708
Gene ExpressionZNF14 [ NCBI-GEO ]   ZNF14 [ EBI - ARRAY_EXPRESS ]   ZNF14 [ SEEK ]   ZNF14 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7561
GTEX Portal (Tissue expression)ZNF14
Human Protein AtlasENSG00000105708-ZNF14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP17017   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP17017  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP17017
Splice isoforms : SwissVarP17017
PhosPhoSitePlusP17017
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF14
DMDM Disease mutations7561
Blocks (Seattle)ZNF14
SuperfamilyP17017
Human Protein Atlas [tissue]ENSG00000105708-ZNF14 [tissue]
Peptide AtlasP17017
HPRD01933
IPIIPI00414873   
Protein Interaction databases
DIP (DOE-UCLA)P17017
IntAct (EBI)P17017
FunCoupENSG00000105708
BioGRIDZNF14
STRING (EMBL)ZNF14
ZODIACZNF14
Ontologies - Pathways
QuickGOP17017
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF14
Atlas of Cancer Signalling NetworkZNF14
Wikipedia pathwaysZNF14
Orthology - Evolution
OrthoDB7561
GeneTree (enSembl)ENSG00000105708
Phylogenetic Trees/Animal Genes : TreeFamZNF14
HOVERGENP17017
HOGENOMP17017
Homologs : HomoloGeneZNF14
Homology/Alignments : Family Browser (UCSC)ZNF14
Gene fusions - Rearrangements
Fusion: TCGA_MDACCZNF14 RGL3
Fusion: TCGA_MDACCZNF14 STAT5A
Tumor Fusion PortalZNF14
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF14
dbVarZNF14
ClinVarZNF14
1000_GenomesZNF14 
Exome Variant ServerZNF14
ExAC (Exome Aggregation Consortium)ENSG00000105708
GNOMAD BrowserENSG00000105708
Genetic variants : HAPMAP7561
Genomic Variants (DGV)ZNF14 [DGVbeta]
DECIPHERZNF14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF14 
Mutations
ICGC Data PortalZNF14 
TCGA Data PortalZNF14 
Broad Tumor PortalZNF14
OASIS PortalZNF14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF14
DgiDB (Drug Gene Interaction Database)ZNF14
DoCM (Curated mutations)ZNF14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF14 (select a term)
intoGenZNF14
Cancer3DZNF14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194556   
Orphanet
DisGeNETZNF14
MedgenZNF14
Genetic Testing Registry ZNF14
NextProtP17017 [Medical]
TSGene7561
GENETestsZNF14
Target ValidationZNF14
Huge Navigator ZNF14 [HugePedia]
snp3D : Map Gene to Disease7561
BioCentury BCIQZNF14
ClinGenZNF14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7561
Chemical/Pharm GKB GenePA37511
Clinical trialZNF14
Miscellaneous
canSAR (ICR)ZNF14 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF14
EVEXZNF14
GoPubMedZNF14
iHOPZNF14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:40:23 CET 2017

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