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ZNF141 (zinc finger protein 141)

Identity

Alias (NCBI)D4S90
pHZ-44
HGNC (Hugo) ZNF141
HGNC Alias symbpHZ-44
HGNC Previous nameD4S90
HGNC Previous namezinc finger protein 141 (clone pHZ-44)
LocusID (NCBI) 7700
Atlas_Id 75999
Location 4p16.3  [Link to chromosome band 4p16]
Location_base_pair Starts at 337814 and ends at 384868 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FZD3 (8p21.1)::ZNF141 (4p16.3)ZNF141 (4p16.3)::NUP98 (11p15.4)ZNF141 (4p16.3)::ZNF254 (19p12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF141   12926
Cards
Entrez_Gene (NCBI)ZNF141    zinc finger protein 141
AliasesD4S90; pHZ-44
GeneCards (Weizmann)ZNF141
Ensembl hg19 (Hinxton)ENSG00000131127 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000131127 [Gene_View]  ENSG00000131127 [Sequence]  chr4:337814-384868 [Contig_View]  ZNF141 [Vega]
ICGC DataPortalENSG00000131127
TCGA cBioPortalZNF141
AceView (NCBI)ZNF141
Genatlas (Paris)ZNF141
SOURCE (Princeton)ZNF141
Genetics Home Reference (NIH)ZNF141
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF141  -     chr4:337814-384868 +  4p16.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF141  -     4p16.3   [Description]    (hg19-Feb_2009)
GoldenPathZNF141 - 4p16.3 [CytoView hg19]  ZNF141 - 4p16.3 [CytoView hg38]
ImmunoBaseENSG00000131127
Genome Data Viewer NCBIZNF141 [Mapview hg19]  
OMIM194648   615226   
Gene and transcription
Genbank (Entrez)AK091543 BC036854 BC057244 BC074853 CA312024
RefSeq transcript (Entrez)NM_001348277 NM_001348278 NM_001348279 NM_001348280 NM_003441
Consensus coding sequences : CCDS (NCBI)ZNF141
Gene ExpressionZNF141 [ NCBI-GEO ]   ZNF141 [ EBI - ARRAY_EXPRESS ]   ZNF141 [ SEEK ]   ZNF141 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF141 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF141 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7700
GTEX Portal (Tissue expression)ZNF141
Human Protein AtlasENSG00000131127-ZNF141 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15928   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15928  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15928
PhosPhoSitePlusQ15928
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF141
SuperfamilyQ15928
AlphaFold pdb e-kbQ15928   
Human Protein Atlas [tissue]ENSG00000131127-ZNF141 [tissue]
HPRD01937
Protein Interaction databases
DIP (DOE-UCLA)Q15928
IntAct (EBI)Q15928
BioGRIDZNF141
STRING (EMBL)ZNF141
ZODIACZNF141
Ontologies - Pathways
QuickGOQ15928
Ontology : AmiGOnegative regulation of transcription by RNA polymerase II  RNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  transcription by RNA polymerase II  anatomical structure morphogenesis  limb morphogenesis  metal ion binding  
Ontology : EGO-EBInegative regulation of transcription by RNA polymerase II  RNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  transcription by RNA polymerase II  anatomical structure morphogenesis  limb morphogenesis  metal ion binding  
NDEx NetworkZNF141
Atlas of Cancer Signalling NetworkZNF141
Wikipedia pathwaysZNF141
Orthology - Evolution
OrthoDB7700
GeneTree (enSembl)ENSG00000131127
Phylogenetic Trees/Animal Genes : TreeFamZNF141
Homologs : HomoloGeneZNF141
Homology/Alignments : Family Browser (UCSC)ZNF141
Gene fusions - Rearrangements
Fusion : QuiverZNF141
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF141 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF141
dbVarZNF141
ClinVarZNF141
MonarchZNF141
1000_GenomesZNF141 
Exome Variant ServerZNF141
GNOMAD BrowserENSG00000131127
Varsome BrowserZNF141
ACMGZNF141 variants
VarityQ15928
Genomic Variants (DGV)ZNF141 [DGVbeta]
DECIPHERZNF141 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF141 
Mutations
ICGC Data PortalZNF141 
TCGA Data PortalZNF141 
Broad Tumor PortalZNF141
OASIS PortalZNF141 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF141  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF141
Mutations and Diseases : HGMDZNF141
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF141
DgiDB (Drug Gene Interaction Database)ZNF141
DoCM (Curated mutations)ZNF141
CIViC (Clinical Interpretations of Variants in Cancer)ZNF141
Cancer3DZNF141
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194648    615226   
Orphanet21028   
DisGeNETZNF141
MedgenZNF141
Genetic Testing Registry ZNF141
NextProtQ15928 [Medical]
GENETestsZNF141
Target ValidationZNF141
Huge Navigator ZNF141 [HugePedia]
ClinGenZNF141
Clinical trials, drugs, therapy
MyCancerGenomeZNF141
Protein Interactions : CTDZNF141
Pharm GKB GenePA37513
PharosQ15928
Clinical trialZNF141
Miscellaneous
canSAR (ICR)ZNF141
HarmonizomeZNF141
ARCHS4ZNF141
DataMed IndexZNF141
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF141
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:59:17 CET 2022

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