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ZNF141 (zinc finger protein 141)

Identity

Alias_namesD4S90
zinc finger protein 141 (clone pHZ-44)
Alias_symbol (synonym)pHZ-44
Other alias
HGNC (Hugo) ZNF141
LocusID (NCBI) 7700
Atlas_Id 75999
Location 4p16.3  [Link to chromosome band 4p16]
Location_base_pair Starts at 337779 and ends at 384864 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FZD3 (8p21.1) / ZNF141 (4p16.3)ZNF141 (4p16.3) / NUP98 (11p15.4)ZNF141 (4p16.3) / ZNF254 (19p12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF141   12926
Cards
Entrez_Gene (NCBI)ZNF141  7700  zinc finger protein 141
AliasesD4S90; pHZ-44
GeneCards (Weizmann)ZNF141
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:337779-384864 [Contig_View]  ZNF141 [Vega]
TCGA cBioPortalZNF141
AceView (NCBI)ZNF141
Genatlas (Paris)ZNF141
WikiGenes7700
SOURCE (Princeton)ZNF141
Genetics Home Reference (NIH)ZNF141
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF141  -     chr4:337779-384864 +  4p16.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF141  -     4p16.3   [Description]    (hg19-Feb_2009)
EnsemblZNF141 - 4p16.3 [CytoView hg19]  ZNF141 - 4p16.3 [CytoView hg38]
Mapping of homologs : NCBIZNF141 [Mapview hg19]  ZNF141 [Mapview hg38]
OMIM194648   615226   
Gene and transcription
Genbank (Entrez)BC036854 BC057244 BC074853 CA312024 DA385292
RefSeq transcript (Entrez)NM_001348277 NM_001348278 NM_001348279 NM_001348280 NM_003441
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF141
Cluster EST : UnigeneHs.686255 [ NCBI ]
CGAP (NCI)Hs.686255
Gene ExpressionZNF141 [ NCBI-GEO ]   ZNF141 [ EBI - ARRAY_EXPRESS ]   ZNF141 [ SEEK ]   ZNF141 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF141 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7700
GTEX Portal (Tissue expression)ZNF141
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15928   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15928  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15928
Splice isoforms : SwissVarQ15928
PhosPhoSitePlusQ15928
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF141
DMDM Disease mutations7700
Blocks (Seattle)ZNF141
SuperfamilyQ15928
Peptide AtlasQ15928
HPRD01937
IPIIPI00456864   IPI00964807   IPI00968013   
Protein Interaction databases
DIP (DOE-UCLA)Q15928
IntAct (EBI)Q15928
BioGRIDZNF141
STRING (EMBL)ZNF141
ZODIACZNF141
Ontologies - Pathways
QuickGOQ15928
Ontology : AmiGODNA binding  nucleus  regulation of transcription, DNA-templated  transcription from RNA polymerase II promoter  anatomical structure morphogenesis  limb morphogenesis  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  regulation of transcription, DNA-templated  transcription from RNA polymerase II promoter  anatomical structure morphogenesis  limb morphogenesis  metal ion binding  
NDEx NetworkZNF141
Atlas of Cancer Signalling NetworkZNF141
Wikipedia pathwaysZNF141
Orthology - Evolution
OrthoDB7700
Phylogenetic Trees/Animal Genes : TreeFamZNF141
HOVERGENQ15928
HOGENOMQ15928
Homologs : HomoloGeneZNF141
Homology/Alignments : Family Browser (UCSC)ZNF141
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF141 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF141
dbVarZNF141
ClinVarZNF141
1000_GenomesZNF141 
Exome Variant ServerZNF141
ExAC (Exome Aggregation Consortium)ZNF141 (select the gene name)
Genetic variants : HAPMAP7700
Genomic Variants (DGV)ZNF141 [DGVbeta]
DECIPHERZNF141 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF141 
Mutations
ICGC Data PortalZNF141 
TCGA Data PortalZNF141 
Broad Tumor PortalZNF141
OASIS PortalZNF141 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF141  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF141
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF141
DgiDB (Drug Gene Interaction Database)ZNF141
DoCM (Curated mutations)ZNF141 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF141 (select a term)
intoGenZNF141
Cancer3DZNF141(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194648    615226   
Orphanet21028   
MedgenZNF141
Genetic Testing Registry ZNF141
NextProtQ15928 [Medical]
TSGene7700
GENETestsZNF141
Huge Navigator ZNF141 [HugePedia]
snp3D : Map Gene to Disease7700
BioCentury BCIQZNF141
ClinGenZNF141
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7700
Chemical/Pharm GKB GenePA37513
Clinical trialZNF141
Miscellaneous
canSAR (ICR)ZNF141 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF141
EVEXZNF141
GoPubMedZNF141
iHOPZNF141
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:02:29 CEST 2017

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