| Nomenclature |
|---|
| HGNC (Hugo) | ZNF143 12928 |
| Cards |
|---|
| Entrez_Gene (NCBI) | ZNF143 zinc finger protein 143 |
| Aliases | SBF; STAF; pHZ-1 |
| GeneCards (Weizmann) | ZNF143 |
| Ensembl hg19 (Hinxton) | ENSG00000166478 [Gene_View] |
| Ensembl hg38 (Hinxton) | ENSG00000166478 [Gene_View] ENSG00000166478 [Sequence] chr11:9461012-9528524 [Contig_View] ZNF143 [Vega] |
| ICGC DataPortal | ENSG00000166478 |
| TCGA cBioPortal | ZNF143 |
| AceView (NCBI) | ZNF143 |
| Genatlas (Paris) | ZNF143 |
| SOURCE (Princeton) | ZNF143 |
| Genetics Home Reference (NIH) | ZNF143 |
| Genomic and cartography |
|---|
| GoldenPath hg38 (UCSC) | ZNF143 - chr11:9461012-9528524 + 11p15.4 [Description] (hg38-Dec_2013) |
| GoldenPath hg19 (UCSC) | ZNF143 - 11p15.4 [Description] (hg19-Feb_2009) |
| GoldenPath | ZNF143 - 11p15.4 [CytoView hg19] ZNF143 - 11p15.4 [CytoView hg38] |
| ImmunoBase | ENSG00000166478 |
| genome Data Viewer NCBI | ZNF143 [Mapview hg19] |
| OMIM | 603433 |
| Gene and transcription |
|---|
| Genbank (Entrez) | AF071771 AK291133 AK297214 AK313330 AW162015 |
| RefSeq transcript (Entrez) | NM_001282656 NM_001282657 NM_003442 |
| Consensus coding sequences : CCDS (NCBI) | ZNF143 |
| Alternative Splicing Gallery | ENSG00000166478 |
| Gene Expression | ZNF143 [ NCBI-GEO ] ZNF143 [ EBI - ARRAY_EXPRESS ]
ZNF143 [ SEEK ] ZNF143 [ MEM ] |
| Gene Expression Viewer (FireBrowse) | ZNF143 [ Firebrowse - Broad ] |
| Genevisible | Expression of ZNF143 in : [tissues] [cell-lines] [cancer] [perturbations] |
| BioGPS (Tissue expression) | 7702 |
| GTEX Portal (Tissue expression) | ZNF143 |
| Human Protein Atlas | ENSG00000166478-ZNF143 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | P52747 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
| NextProt | P52747 [Sequence] [Exons] [Medical] [Publications] |
| With graphics : InterPro | P52747 |
| PhosPhoSitePlus | P52747 |
| Domaine pattern : Prosite (Expaxy) | ZINC_FINGER_C2H2_1 (PS00028) ZINC_FINGER_C2H2_2 (PS50157) |
| Domains : Interpro (EBI) | Znf_C2H2_sf Znf_C2H2_type |
| Domain families : Pfam (Sanger) | zf-C2H2 (PF00096) |
| Domain families : Pfam (NCBI) | pfam00096 |
| Domain families : Smart (EMBL) | ZnF_C2H2 (SM00355) |
| Conserved Domain (NCBI) | ZNF143 |
| Superfamily | P52747 |
| AlphaFold pdb e-kb | P52747 |
| Human Protein Atlas [tissue] | ENSG00000166478-ZNF143 [tissue] |
| HPRD | 04578 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | P52747 |
| IntAct (EBI) | P52747 |
| BioGRID | ZNF143 |
| STRING (EMBL) | ZNF143 |
| ZODIAC | ZNF143 |
| Ontologies - Pathways |
|---|
| QuickGO | P52747 |
| Ontology : AmiGO | RNA polymerase II cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific protein binding nucleoplasm regulation of transcription, DNA-templated regulation of transcription by RNA polymerase II regulation of transcription by RNA polymerase III snRNA transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase III metal ion binding positive regulation of snRNA transcription by RNA polymerase II |
| Ontology : EGO-EBI | RNA polymerase II cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific protein binding nucleoplasm regulation of transcription, DNA-templated regulation of transcription by RNA polymerase II regulation of transcription by RNA polymerase III snRNA transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase III metal ion binding positive regulation of snRNA transcription by RNA polymerase II |
| NDEx Network | ZNF143 |
| Atlas of Cancer Signalling Network | ZNF143 |
| Wikipedia pathways | ZNF143 |
| Orthology - Evolution |
|---|
| OrthoDB | 7702 |
| GeneTree (enSembl) | ENSG00000166478 |
| Phylogenetic Trees/Animal Genes : TreeFam | ZNF143 |
| Homologs : HomoloGene | ZNF143 |
| Homology/Alignments : Family Browser (UCSC) | ZNF143 |
| Gene fusions - Rearrangements |
|---|
| Fusion : Mitelman | MEIS2/ZNF143 [15q14/11p15.4] |
| Fusion : Mitelman | SWAP70/ZNF143 [11p15.4/11p15.4] |
| Fusion : Mitelman | ZNF143/TMEM41B [11p15.4/11p15.4] |
| Fusion Portal | MEIS2 15q14 ZNF143 11p15.4 GBM |
| Fusion Portal | SWAP70 11p15.4 ZNF143 11p15.4 LGG LUAD |
| Fusion Portal | ZNF143 11p15.4 TMEM41B 11p15.4 LUAD |
| Fusion : Quiver | ZNF143 |
| Polymorphisms : SNP and Copy number variants |
|---|
| NCBI Variation Viewer | ZNF143 [hg38] |
| dbSNP Single Nucleotide Polymorphism (NCBI) | ZNF143 |
| dbVar | ZNF143 |
| ClinVar | ZNF143 |
| Monarch | ZNF143 |
| 1000_Genomes | ZNF143 |
| Exome Variant Server | ZNF143 |
| GNOMAD Browser | ENSG00000166478 |
| Varsome Browser | ZNF143 |
| Genomic Variants (DGV) | ZNF143 [DGVbeta] |
| DECIPHER | ZNF143 [patients] [syndromes] [variants] [genes] |
| CONAN: Copy Number Analysis | ZNF143 |
| Mutations |
|---|
| ICGC Data Portal | ZNF143 |
| TCGA Data Portal | ZNF143 |
| Broad Tumor Portal | ZNF143 |
| OASIS Portal | ZNF143 [ Somatic mutations - Copy number] |
| Somatic Mutations in Cancer : COSMIC | ZNF143 [overview] [genome browser] [tissue] [distribution] |
| Somatic Mutations in Cancer : COSMIC3D | ZNF143 |
| Mutations and Diseases : HGMD | ZNF143 |
| LOVD (Leiden Open Variation Database) | [gene] [transcripts] [variants] |
| BioMuta | search ZNF143 |
| DgiDB (Drug Gene Interaction Database) | ZNF143 |
| DoCM (Curated mutations) | ZNF143 (select the gene name) |
| CIViC (Clinical Interpretations of Variants in Cancer) | ZNF143 (select a term) |
| Cancer3D | ZNF143(select the gene name) |
| Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
|---|
| OMIM | 603433 |
| Orphanet | |
| DisGeNET | ZNF143 |
| Medgen | ZNF143 |
| Genetic Testing Registry | ZNF143
|
| NextProt | P52747 [Medical] |
| GENETests | ZNF143 |
| Target Validation | ZNF143 |
| Huge Navigator |
ZNF143 [HugePedia] |
| ClinGen | ZNF143 |
| Clinical trials, drugs, therapy |
|---|
| MyCancerGenome | ZNF143 |
| Protein Interactions : CTD | ZNF143 |
| Pharm GKB Gene | PA37515 |
| Pharos | P52747 |
| Clinical trial | ZNF143 |
| Miscellaneous |
|---|
| canSAR (ICR) | ZNF143 |
| Harmonizome | ZNF143 |
| DataMed Index | ZNF143 |
| Probes |
|---|
| Litterature |
|---|
| PubMed | 51 Pubmed reference(s) in Entrez |
| GeneRIFs | Gene References Into Functions (Entrez) |
| EVEX | ZNF143 |
