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ZNF157 (zinc finger protein 157)

Identity

Alias_nameszinc finger protein 157 (HZF22)
Alias_symbol (synonym)HZF22
Other alias
HGNC (Hugo) ZNF157
LocusID (NCBI) 7712
Atlas_Id 76002
Location Xp11.3  [Link to chromosome band Xp11]
Location_base_pair Starts at 47370600 and ends at 47413699 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF157   12942
Cards
Entrez_Gene (NCBI)ZNF157  7712  zinc finger protein 157
AliasesHZF22
GeneCards (Weizmann)ZNF157
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:47370600-47413699 [Contig_View]  ZNF157 [Vega]
TCGA cBioPortalZNF157
AceView (NCBI)ZNF157
Genatlas (Paris)ZNF157
WikiGenes7712
SOURCE (Princeton)ZNF157
Genetics Home Reference (NIH)ZNF157
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF157  -     chrX:47370600-47413699 +  Xp11.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF157  -     Xp11.3   [Description]    (hg19-Feb_2009)
EnsemblZNF157 - Xp11.3 [CytoView hg19]  ZNF157 - Xp11.3 [CytoView hg38]
Mapping of homologs : NCBIZNF157 [Mapview hg19]  ZNF157 [Mapview hg38]
OMIM300024   
Gene and transcription
Genbank (Entrez)BC075003 CO245585 EU446919 U28687
RefSeq transcript (Entrez)NM_003446
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF157
Cluster EST : UnigeneHs.89897 [ NCBI ]
CGAP (NCI)Hs.89897
Gene ExpressionZNF157 [ NCBI-GEO ]   ZNF157 [ EBI - ARRAY_EXPRESS ]   ZNF157 [ SEEK ]   ZNF157 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF157 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7712
GTEX Portal (Tissue expression)ZNF157
Protein : pattern, domain, 3D structure
UniProt/SwissProtP51786   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP51786  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP51786
Splice isoforms : SwissVarP51786
PhosPhoSitePlusP51786
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF157
DMDM Disease mutations7712
Blocks (Seattle)ZNF157
SuperfamilyP51786
Peptide AtlasP51786
HPRD02064
IPIIPI00215646   
Protein Interaction databases
DIP (DOE-UCLA)P51786
IntAct (EBI)P51786
BioGRIDZNF157
STRING (EMBL)ZNF157
ZODIACZNF157
Ontologies - Pathways
QuickGOP51786
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF157
Atlas of Cancer Signalling NetworkZNF157
Wikipedia pathwaysZNF157
Orthology - Evolution
OrthoDB7712
Phylogenetic Trees/Animal Genes : TreeFamZNF157
HOVERGENP51786
HOGENOMP51786
Homologs : HomoloGeneZNF157
Homology/Alignments : Family Browser (UCSC)ZNF157
Gene fusions - Rearrangements
Tumor Fusion PortalZNF157
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF157 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF157
dbVarZNF157
ClinVarZNF157
1000_GenomesZNF157 
Exome Variant ServerZNF157
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP7712
Genomic Variants (DGV)ZNF157 [DGVbeta]
DECIPHERZNF157 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF157 
Mutations
ICGC Data PortalZNF157 
TCGA Data PortalZNF157 
Broad Tumor PortalZNF157
OASIS PortalZNF157 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF157  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF157
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF157
DgiDB (Drug Gene Interaction Database)ZNF157
DoCM (Curated mutations)ZNF157 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF157 (select a term)
intoGenZNF157
Cancer3DZNF157(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300024   
Orphanet
DisGeNETZNF157
MedgenZNF157
Genetic Testing Registry ZNF157
NextProtP51786 [Medical]
TSGene7712
GENETestsZNF157
Target ValidationZNF157
Huge Navigator ZNF157 [HugePedia]
snp3D : Map Gene to Disease7712
BioCentury BCIQZNF157
ClinGenZNF157
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7712
Chemical/Pharm GKB GenePA37525
Clinical trialZNF157
Miscellaneous
canSAR (ICR)ZNF157 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF157
EVEXZNF157
GoPubMedZNF157
iHOPZNF157
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:00:57 CET 2017

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