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ZNF177 (zinc finger protein 177)

Identity

Other aliasPIGX
HGNC (Hugo) ZNF177
LocusID (NCBI) 7730
Atlas_Id 76010
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 9376316 and ends at 9382617 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF559 (19p13.2) / ZNF177 (19p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF177   12966
Cards
Entrez_Gene (NCBI)ZNF177  7730  zinc finger protein 177
AliasesPIGX
GeneCards (Weizmann)ZNF177
Ensembl hg19 (Hinxton)ENSG00000188629 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188629 [Gene_View]  chr19:9376316-9382617 [Contig_View]  ZNF177 [Vega]
ICGC DataPortalENSG00000188629
TCGA cBioPortalZNF177
AceView (NCBI)ZNF177
Genatlas (Paris)ZNF177
WikiGenes7730
SOURCE (Princeton)ZNF177
Genetics Home Reference (NIH)ZNF177
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF177  -     chr19:9376316-9382617 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF177  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblZNF177 - 19p13.2 [CytoView hg19]  ZNF177 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF177 [Mapview hg19]  ZNF177 [Mapview hg38]
OMIM601276   
Gene and transcription
Genbank (Entrez)AK302274 BC012012 BP260204 BX114567 DA338574
RefSeq transcript (Entrez)NM_001172651 NM_003451
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF177
Cluster EST : UnigeneHs.728944 [ NCBI ]
CGAP (NCI)Hs.728944
Alternative Splicing GalleryENSG00000188629
Gene ExpressionZNF177 [ NCBI-GEO ]   ZNF177 [ EBI - ARRAY_EXPRESS ]   ZNF177 [ SEEK ]   ZNF177 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF177 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7730
GTEX Portal (Tissue expression)ZNF177
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13360   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13360  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13360
Splice isoforms : SwissVarQ13360
PhosPhoSitePlusQ13360
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)    zf-H2C2_2 (PF13465)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912    pfam13465   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF177
DMDM Disease mutations7730
Blocks (Seattle)ZNF177
SuperfamilyQ13360
Human Protein AtlasENSG00000188629
Peptide AtlasQ13360
HPRD03175
Protein Interaction databases
DIP (DOE-UCLA)Q13360
IntAct (EBI)Q13360
FunCoupENSG00000188629
BioGRIDZNF177
STRING (EMBL)ZNF177
ZODIACZNF177
Ontologies - Pathways
QuickGOQ13360
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  DNA binding  protein binding  nucleus  transcription, DNA-templated  metal ion binding  blood microparticle  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  DNA binding  protein binding  nucleus  transcription, DNA-templated  metal ion binding  blood microparticle  
NDEx NetworkZNF177
Atlas of Cancer Signalling NetworkZNF177
Wikipedia pathwaysZNF177
Orthology - Evolution
OrthoDB7730
GeneTree (enSembl)ENSG00000188629
Phylogenetic Trees/Animal Genes : TreeFamZNF177
HOVERGENQ13360
HOGENOMQ13360
Homologs : HomoloGeneZNF177
Homology/Alignments : Family Browser (UCSC)ZNF177
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF177 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF177
dbVarZNF177
ClinVarZNF177
1000_GenomesZNF177 
Exome Variant ServerZNF177
ExAC (Exome Aggregation Consortium)ZNF177 (select the gene name)
Genetic variants : HAPMAP7730
Genomic Variants (DGV)ZNF177 [DGVbeta]
DECIPHERZNF177 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF177 
Mutations
ICGC Data PortalZNF177 
TCGA Data PortalZNF177 
Broad Tumor PortalZNF177
OASIS PortalZNF177 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF177  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF177
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF177
DgiDB (Drug Gene Interaction Database)ZNF177
DoCM (Curated mutations)ZNF177 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF177 (select a term)
intoGenZNF177
Cancer3DZNF177(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601276   
Orphanet
MedgenZNF177
Genetic Testing Registry ZNF177
NextProtQ13360 [Medical]
TSGene7730
GENETestsZNF177
Target ValidationZNF177
Huge Navigator ZNF177 [HugePedia]
snp3D : Map Gene to Disease7730
BioCentury BCIQZNF177
ClinGenZNF177
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7730
Chemical/Pharm GKB GenePA37548
Clinical trialZNF177
Miscellaneous
canSAR (ICR)ZNF177 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF177
EVEXZNF177
GoPubMedZNF177
iHOPZNF177
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:57 CEST 2017

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