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ZNF181 (zinc finger protein 181)

Identity

Alias_nameszinc finger protein 181 (HHZ181)
Alias_symbol (synonym)HHZ181
MGC44316
Other alias
HGNC (Hugo) ZNF181
LocusID (NCBI) 339318
Atlas_Id 76012
Location 19q13.11  [Link to chromosome band 19q13]
Location_base_pair Starts at 34734575 and ends at 34742869 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF181   12971
Cards
Entrez_Gene (NCBI)ZNF181  339318  zinc finger protein 181
AliasesHHZ181
GeneCards (Weizmann)ZNF181
Ensembl hg19 (Hinxton)ENSG00000197841 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197841 [Gene_View]  chr19:34734575-34742869 [Contig_View]  ZNF181 [Vega]
ICGC DataPortalENSG00000197841
TCGA cBioPortalZNF181
AceView (NCBI)ZNF181
Genatlas (Paris)ZNF181
WikiGenes339318
SOURCE (Princeton)ZNF181
Genetics Home Reference (NIH)ZNF181
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF181  -     chr19:34734575-34742869 +  19q13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF181  -     19q13.11   [Description]    (hg19-Feb_2009)
EnsemblZNF181 - 19q13.11 [CytoView hg19]  ZNF181 - 19q13.11 [CytoView hg38]
Mapping of homologs : NCBIZNF181 [Mapview hg19]  ZNF181 [Mapview hg38]
OMIM606741   
Gene and transcription
Genbank (Entrez)AI800428 AK295492 AK297316 BC043228 BC104759
RefSeq transcript (Entrez)NM_001029997 NM_001145665
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF181
Cluster EST : UnigeneHs.720472 [ NCBI ]
CGAP (NCI)Hs.720472
Alternative Splicing GalleryENSG00000197841
Gene ExpressionZNF181 [ NCBI-GEO ]   ZNF181 [ EBI - ARRAY_EXPRESS ]   ZNF181 [ SEEK ]   ZNF181 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF181 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)339318
GTEX Portal (Tissue expression)ZNF181
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2M3W8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2M3W8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2M3W8
Splice isoforms : SwissVarQ2M3W8
PhosPhoSitePlusQ2M3W8
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_BED    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_BED (SM00614)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF181
DMDM Disease mutations339318
Blocks (Seattle)ZNF181
SuperfamilyQ2M3W8
Human Protein AtlasENSG00000197841
Peptide AtlasQ2M3W8
HPRD18783
IPIIPI00243548   IPI00738226   IPI00945468   IPI01014001   
Protein Interaction databases
DIP (DOE-UCLA)Q2M3W8
IntAct (EBI)Q2M3W8
FunCoupENSG00000197841
BioGRIDZNF181
STRING (EMBL)ZNF181
ZODIACZNF181
Ontologies - Pathways
QuickGOQ2M3W8
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF181
Atlas of Cancer Signalling NetworkZNF181
Wikipedia pathwaysZNF181
Orthology - Evolution
OrthoDB339318
GeneTree (enSembl)ENSG00000197841
Phylogenetic Trees/Animal Genes : TreeFamZNF181
HOVERGENQ2M3W8
HOGENOMQ2M3W8
Homologs : HomoloGeneZNF181
Homology/Alignments : Family Browser (UCSC)ZNF181
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF181 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF181
dbVarZNF181
ClinVarZNF181
1000_GenomesZNF181 
Exome Variant ServerZNF181
ExAC (Exome Aggregation Consortium)ZNF181 (select the gene name)
Genetic variants : HAPMAP339318
Genomic Variants (DGV)ZNF181 [DGVbeta]
DECIPHERZNF181 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF181 
Mutations
ICGC Data PortalZNF181 
TCGA Data PortalZNF181 
Broad Tumor PortalZNF181
OASIS PortalZNF181 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF181  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF181
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF181
DgiDB (Drug Gene Interaction Database)ZNF181
DoCM (Curated mutations)ZNF181 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF181 (select a term)
intoGenZNF181
Cancer3DZNF181(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606741   
Orphanet
MedgenZNF181
Genetic Testing Registry ZNF181
NextProtQ2M3W8 [Medical]
TSGene339318
GENETestsZNF181
Target ValidationZNF181
Huge Navigator ZNF181 [HugePedia]
snp3D : Map Gene to Disease339318
BioCentury BCIQZNF181
ClinGenZNF181
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339318
Chemical/Pharm GKB GenePA37553
Clinical trialZNF181
Miscellaneous
canSAR (ICR)ZNF181 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF181
EVEXZNF181
GoPubMedZNF181
iHOPZNF181
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:27 CEST 2017

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