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ZNF182 (zinc finger protein 182)

Identity

Alias_namesZNF21
zinc finger protein 182 (HHZ150)
zinc finger protein 21 (KOX 14)
Alias_symbol (synonym)KOX14
HHZ150
Zfp182
Other alias
HGNC (Hugo) ZNF182
LocusID (NCBI) 7569
Atlas_Id 76013
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 47974851 and ends at 48003978 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF182   13001
Cards
Entrez_Gene (NCBI)ZNF182  7569  zinc finger protein 182
AliasesHHZ150; KOX14; ZNF21; Zfp182
GeneCards (Weizmann)ZNF182
Ensembl hg19 (Hinxton)ENSG00000147118 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000147118 [Gene_View]  chrX:47974851-48003978 [Contig_View]  ZNF182 [Vega]
ICGC DataPortalENSG00000147118
TCGA cBioPortalZNF182
AceView (NCBI)ZNF182
Genatlas (Paris)ZNF182
WikiGenes7569
SOURCE (Princeton)ZNF182
Genetics Home Reference (NIH)ZNF182
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF182  -     chrX:47974851-48003978 -  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF182  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblZNF182 - Xp11.23 [CytoView hg19]  ZNF182 - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIZNF182 [Mapview hg19]  ZNF182 [Mapview hg38]
OMIM314993   
Gene and transcription
Genbank (Entrez)AK097687 AK122874 AK130362 AK299325 AW291763
RefSeq transcript (Entrez)NM_001007088 NM_001178099 NM_006962
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF182
Cluster EST : UnigeneHs.189690 [ NCBI ]
CGAP (NCI)Hs.189690
Alternative Splicing GalleryENSG00000147118
Gene ExpressionZNF182 [ NCBI-GEO ]   ZNF182 [ EBI - ARRAY_EXPRESS ]   ZNF182 [ SEEK ]   ZNF182 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF182 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7569
GTEX Portal (Tissue expression)ZNF182
Protein : pattern, domain, 3D structure
UniProt/SwissProtP17025   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP17025  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP17025
Splice isoforms : SwissVarP17025
PhosPhoSitePlusP17025
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF182
DMDM Disease mutations7569
Blocks (Seattle)ZNF182
SuperfamilyP17025
Human Protein AtlasENSG00000147118
Peptide AtlasP17025
HPRD11781
IPIIPI00479943   IPI00096308   
Protein Interaction databases
DIP (DOE-UCLA)P17025
IntAct (EBI)P17025
FunCoupENSG00000147118
BioGRIDZNF182
STRING (EMBL)ZNF182
ZODIACZNF182
Ontologies - Pathways
QuickGOP17025
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF182
Atlas of Cancer Signalling NetworkZNF182
Wikipedia pathwaysZNF182
Orthology - Evolution
OrthoDB7569
GeneTree (enSembl)ENSG00000147118
Phylogenetic Trees/Animal Genes : TreeFamZNF182
HOVERGENP17025
HOGENOMP17025
Homologs : HomoloGeneZNF182
Homology/Alignments : Family Browser (UCSC)ZNF182
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF182 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF182
dbVarZNF182
ClinVarZNF182
1000_GenomesZNF182 
Exome Variant ServerZNF182
ExAC (Exome Aggregation Consortium)ZNF182 (select the gene name)
Genetic variants : HAPMAP7569
Genomic Variants (DGV)ZNF182 [DGVbeta]
DECIPHERZNF182 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF182 
Mutations
ICGC Data PortalZNF182 
TCGA Data PortalZNF182 
Broad Tumor PortalZNF182
OASIS PortalZNF182 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF182  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF182
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch ZNF182
DgiDB (Drug Gene Interaction Database)ZNF182
DoCM (Curated mutations)ZNF182 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF182 (select a term)
intoGenZNF182
Cancer3DZNF182(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM314993   
Orphanet
MedgenZNF182
Genetic Testing Registry ZNF182
NextProtP17025 [Medical]
TSGene7569
GENETestsZNF182
Target ValidationZNF182
Huge Navigator ZNF182 [HugePedia]
snp3D : Map Gene to Disease7569
BioCentury BCIQZNF182
ClinGenZNF182
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7569
Chemical/Pharm GKB GenePA37581
Clinical trialZNF182
Miscellaneous
canSAR (ICR)ZNF182 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF182
EVEXZNF182
GoPubMedZNF182
iHOPZNF182
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:27 CEST 2017

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