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ZNF184 (zinc finger protein 184)

Identity

Other aliaskr-ZNF3
HGNC (Hugo) ZNF184
LocusID (NCBI) 7738
Atlas_Id 56943
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 27450742 and ends at 27473118 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF184 (6p22.1) / CD2AP (6p12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(6;6)(p12;p22) ZNF184/CD2AP


External links

Nomenclature
HGNC (Hugo)ZNF184   12975
Cards
Entrez_Gene (NCBI)ZNF184  7738  zinc finger protein 184
Aliaseskr-ZNF3
GeneCards (Weizmann)ZNF184
Ensembl hg19 (Hinxton)ENSG00000096654 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000096654 [Gene_View]  ENSG00000096654 [Sequence]  chr6:27450742-27473118 [Contig_View]  ZNF184 [Vega]
ICGC DataPortalENSG00000096654
TCGA cBioPortalZNF184
AceView (NCBI)ZNF184
Genatlas (Paris)ZNF184
WikiGenes7738
SOURCE (Princeton)ZNF184
Genetics Home Reference (NIH)ZNF184
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF184  -     chr6:27450742-27473118 -  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF184  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblZNF184 - 6p22.1 [CytoView hg19]  ZNF184 - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBIZNF184 [Mapview hg19]  ZNF184 [Mapview hg38]
OMIM602277   
Gene and transcription
Genbank (Entrez)AA355479 AI610079 AK123011 AK131264 AK312804
RefSeq transcript (Entrez)NM_001318891 NM_001318892 NM_001318893 NM_001347832 NM_007149
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF184
Cluster EST : UnigeneHs.661037 [ NCBI ]
CGAP (NCI)Hs.661037
Alternative Splicing GalleryENSG00000096654
Gene ExpressionZNF184 [ NCBI-GEO ]   ZNF184 [ EBI - ARRAY_EXPRESS ]   ZNF184 [ SEEK ]   ZNF184 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF184 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7738
GTEX Portal (Tissue expression)ZNF184
Human Protein AtlasENSG00000096654-ZNF184 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ99676   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ99676  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ99676
Splice isoforms : SwissVarQ99676
PhosPhoSitePlusQ99676
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF184
DMDM Disease mutations7738
Blocks (Seattle)ZNF184
SuperfamilyQ99676
Human Protein Atlas [tissue]ENSG00000096654-ZNF184 [tissue]
Peptide AtlasQ99676
IPIIPI00293575   IPI01016022   IPI00940740   
Protein Interaction databases
DIP (DOE-UCLA)Q99676
IntAct (EBI)Q99676
FunCoupENSG00000096654
BioGRIDZNF184
STRING (EMBL)ZNF184
ZODIACZNF184
Ontologies - Pathways
QuickGOQ99676
Ontology : AmiGODNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  nucleus  regulation of transcription by RNA polymerase II  zinc ion binding  
Ontology : EGO-EBIDNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  nucleus  regulation of transcription by RNA polymerase II  zinc ion binding  
NDEx NetworkZNF184
Atlas of Cancer Signalling NetworkZNF184
Wikipedia pathwaysZNF184
Orthology - Evolution
OrthoDB7738
GeneTree (enSembl)ENSG00000096654
Phylogenetic Trees/Animal Genes : TreeFamZNF184
HOVERGENQ99676
HOGENOMQ99676
Homologs : HomoloGeneZNF184
Homology/Alignments : Family Browser (UCSC)ZNF184
Gene fusions - Rearrangements
Fusion : QuiverZNF184
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF184 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF184
dbVarZNF184
ClinVarZNF184
1000_GenomesZNF184 
Exome Variant ServerZNF184
ExAC (Exome Aggregation Consortium)ENSG00000096654
GNOMAD BrowserENSG00000096654
Varsome BrowserZNF184
Genetic variants : HAPMAP7738
Genomic Variants (DGV)ZNF184 [DGVbeta]
DECIPHERZNF184 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF184 
Mutations
ICGC Data PortalZNF184 
TCGA Data PortalZNF184 
Broad Tumor PortalZNF184
OASIS PortalZNF184 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF184  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF184
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF184
DgiDB (Drug Gene Interaction Database)ZNF184
DoCM (Curated mutations)ZNF184 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF184 (select a term)
intoGenZNF184
Cancer3DZNF184(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602277   
Orphanet
DisGeNETZNF184
MedgenZNF184
Genetic Testing Registry ZNF184
NextProtQ99676 [Medical]
TSGene7738
GENETestsZNF184
Target ValidationZNF184
Huge Navigator ZNF184 [HugePedia]
snp3D : Map Gene to Disease7738
BioCentury BCIQZNF184
ClinGenZNF184
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7738
Chemical/Pharm GKB GenePA37557
Clinical trialZNF184
Miscellaneous
canSAR (ICR)ZNF184 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF184
EVEXZNF184
GoPubMedZNF184
iHOPZNF184
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:51:17 CET 2018

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