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ZNF205 (zinc finger protein 205)

Identity

Alias_namesZNF210
Alias_symbol (synonym)Zfp13
Other aliasRhitH
HGNC (Hugo) ZNF205
LocusID (NCBI) 7755
Atlas_Id 76024
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 3112562 and ends at 3120517 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF205   12996
Cards
Entrez_Gene (NCBI)ZNF205  7755  zinc finger protein 205
AliasesRhitH; ZNF210; Zfp13
GeneCards (Weizmann)ZNF205
Ensembl hg19 (Hinxton)ENSG00000122386 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000122386 [Gene_View]  chr16:3112562-3120517 [Contig_View]  ZNF205 [Vega]
ICGC DataPortalENSG00000122386
TCGA cBioPortalZNF205
AceView (NCBI)ZNF205
Genatlas (Paris)ZNF205
WikiGenes7755
SOURCE (Princeton)ZNF205
Genetics Home Reference (NIH)ZNF205
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF205  -     chr16:3112562-3120517 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF205  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblZNF205 - 16p13.3 [CytoView hg19]  ZNF205 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIZNF205 [Mapview hg19]  ZNF205 [Mapview hg38]
OMIM603436   
Gene and transcription
Genbank (Entrez)AB672633 AF060865 AK313009 BC002810 BI826058
RefSeq transcript (Entrez)NM_001042428 NM_001278158 NM_003456
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF205
Cluster EST : UnigeneHs.592088 [ NCBI ]
CGAP (NCI)Hs.592088
Alternative Splicing GalleryENSG00000122386
Gene ExpressionZNF205 [ NCBI-GEO ]   ZNF205 [ EBI - ARRAY_EXPRESS ]   ZNF205 [ SEEK ]   ZNF205 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF205 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7755
GTEX Portal (Tissue expression)ZNF205
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95201   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95201  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95201
Splice isoforms : SwissVarO95201
PhosPhoSitePlusO95201
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF205
DMDM Disease mutations7755
Blocks (Seattle)ZNF205
SuperfamilyO95201
Human Protein AtlasENSG00000122386
Peptide AtlasO95201
HPRD04580
IPIIPI00029377   IPI00852795   IPI00852742   
Protein Interaction databases
DIP (DOE-UCLA)O95201
IntAct (EBI)O95201
FunCoupENSG00000122386
BioGRIDZNF205
STRING (EMBL)ZNF205
ZODIACZNF205
Ontologies - Pathways
QuickGOO95201
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  DNA binding  protein binding  nucleus  mitochondrion  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  positive regulation of hydrogen peroxide biosynthetic process  positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  DNA binding  protein binding  nucleus  mitochondrion  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  positive regulation of hydrogen peroxide biosynthetic process  positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  
NDEx NetworkZNF205
Atlas of Cancer Signalling NetworkZNF205
Wikipedia pathwaysZNF205
Orthology - Evolution
OrthoDB7755
GeneTree (enSembl)ENSG00000122386
Phylogenetic Trees/Animal Genes : TreeFamZNF205
HOVERGENO95201
HOGENOMO95201
Homologs : HomoloGeneZNF205
Homology/Alignments : Family Browser (UCSC)ZNF205
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF205 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF205
dbVarZNF205
ClinVarZNF205
1000_GenomesZNF205 
Exome Variant ServerZNF205
ExAC (Exome Aggregation Consortium)ZNF205 (select the gene name)
Genetic variants : HAPMAP7755
Genomic Variants (DGV)ZNF205 [DGVbeta]
DECIPHERZNF205 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF205 
Mutations
ICGC Data PortalZNF205 
TCGA Data PortalZNF205 
Broad Tumor PortalZNF205
OASIS PortalZNF205 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF205  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF205
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF205
DgiDB (Drug Gene Interaction Database)ZNF205
DoCM (Curated mutations)ZNF205 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF205 (select a term)
intoGenZNF205
Cancer3DZNF205(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603436   
Orphanet
MedgenZNF205
Genetic Testing Registry ZNF205
NextProtO95201 [Medical]
TSGene7755
GENETestsZNF205
Target ValidationZNF205
Huge Navigator ZNF205 [HugePedia]
snp3D : Map Gene to Disease7755
BioCentury BCIQZNF205
ClinGenZNF205
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7755
Chemical/Pharm GKB GenePA37576
Clinical trialZNF205
Miscellaneous
canSAR (ICR)ZNF205 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF205
EVEXZNF205
GoPubMedZNF205
iHOPZNF205
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:28 CEST 2017

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