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ZNF208 (zinc finger protein 208)

Identity

Alias (NCBI)PMIDP
ZNF95
HGNC (Hugo) ZNF208
HGNC Alias symbPMIDP
ZNF95
HGNC Alias namezinc finger protein 95
LocusID (NCBI) 7757
Atlas_Id 57435
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 21966095 and ends at 22010943 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
YAE1D1 (7p14.1)::ZNF208 (19p12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF208   12999
Cards
Entrez_Gene (NCBI)ZNF208    zinc finger protein 208
AliasesPMIDP; ZNF95
GeneCards (Weizmann)ZNF208
Ensembl hg19 (Hinxton)ENSG00000160321 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160321 [Gene_View]  ENSG00000160321 [Sequence]  chr19:21966095-22010943 [Contig_View]  ZNF208 [Vega]
ICGC DataPortalENSG00000160321
TCGA cBioPortalZNF208
AceView (NCBI)ZNF208
Genatlas (Paris)ZNF208
SOURCE (Princeton)ZNF208
Genetics Home Reference (NIH)ZNF208
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF208  -     chr19:21966095-22010943 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF208  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF208 - 19p12 [CytoView hg19]  ZNF208 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000160321
Genome Data Viewer NCBIZNF208 [Mapview hg19]  
OMIM603977   
Gene and transcription
Genbank (Entrez)AK096236 BC038199 BX281273 CB997649
RefSeq transcript (Entrez)NM_001329971 NM_001329972 NM_001329973 NM_001329974 NM_007153
Consensus coding sequences : CCDS (NCBI)ZNF208
Gene ExpressionZNF208 [ NCBI-GEO ]   ZNF208 [ EBI - ARRAY_EXPRESS ]   ZNF208 [ SEEK ]   ZNF208 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF208 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF208 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7757
GTEX Portal (Tissue expression)ZNF208
Human Protein AtlasENSG00000160321-ZNF208 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43345   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43345  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43345
PhosPhoSitePlusO43345
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF208
SuperfamilyO43345
AlphaFold pdb e-kbO43345   
Human Protein Atlas [tissue]ENSG00000160321-ZNF208 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)O43345
IntAct (EBI)O43345
BioGRIDZNF208
STRING (EMBL)ZNF208
ZODIACZNF208
Ontologies - Pathways
QuickGOO43345
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  nucleus  regulation of transcription by RNA polymerase II  zinc ion binding  positive regulation of transcription by RNA polymerase II  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  nucleus  regulation of transcription by RNA polymerase II  zinc ion binding  positive regulation of transcription by RNA polymerase II  
NDEx NetworkZNF208
Atlas of Cancer Signalling NetworkZNF208
Wikipedia pathwaysZNF208
Orthology - Evolution
OrthoDB7757
GeneTree (enSembl)ENSG00000160321
Phylogenetic Trees/Animal Genes : TreeFamZNF208
Homologs : HomoloGeneZNF208
Homology/Alignments : Family Browser (UCSC)ZNF208
Gene fusions - Rearrangements
Fusion : QuiverZNF208
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF208 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF208
dbVarZNF208
ClinVarZNF208
MonarchZNF208
1000_GenomesZNF208 
Exome Variant ServerZNF208
GNOMAD BrowserENSG00000160321
Varsome BrowserZNF208
ACMGZNF208 variants
VarityO43345
Genomic Variants (DGV)ZNF208 [DGVbeta]
DECIPHERZNF208 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF208 
Mutations
ICGC Data PortalZNF208 
TCGA Data PortalZNF208 
Broad Tumor PortalZNF208
OASIS PortalZNF208 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF208  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF208
Mutations and Diseases : HGMDZNF208
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF208
DgiDB (Drug Gene Interaction Database)ZNF208
DoCM (Curated mutations)ZNF208
CIViC (Clinical Interpretations of Variants in Cancer)ZNF208
Cancer3DZNF208
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603977   
Orphanet
DisGeNETZNF208
MedgenZNF208
Genetic Testing Registry ZNF208
NextProtO43345 [Medical]
GENETestsZNF208
Target ValidationZNF208
Huge Navigator ZNF208 [HugePedia]
ClinGenZNF208
Clinical trials, drugs, therapy
MyCancerGenomeZNF208
Protein Interactions : CTDZNF208
Pharm GKB GenePA37579
PharosO43345
Clinical trialZNF208
Miscellaneous
canSAR (ICR)ZNF208
HarmonizomeZNF208
ARCHS4ZNF208
DataMed IndexZNF208
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF208
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:07:27 CET 2022

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