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ZNF211 (zinc finger protein 211)

Identity

Alias_symbol (synonym)ZNF-25
CH2H2-25
Other aliasC2H2-25
HGNC (Hugo) ZNF211
LocusID (NCBI) 10520
Atlas_Id 76027
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 57633167 and ends at 57644046 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
UBL3 (13q12.3) / ZNF211 (19q13.43)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF211   13003
Cards
Entrez_Gene (NCBI)ZNF211  10520  zinc finger protein 211
AliasesC2H2-25; CH2H2-25; ZNF-25
GeneCards (Weizmann)ZNF211
Ensembl hg19 (Hinxton)ENSG00000121417 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000121417 [Gene_View]  chr19:57633167-57644046 [Contig_View]  ZNF211 [Vega]
ICGC DataPortalENSG00000121417
TCGA cBioPortalZNF211
AceView (NCBI)ZNF211
Genatlas (Paris)ZNF211
WikiGenes10520
SOURCE (Princeton)ZNF211
Genetics Home Reference (NIH)ZNF211
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF211  -     chr19:57633167-57644046 +  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF211  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblZNF211 - 19q13.43 [CytoView hg19]  ZNF211 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIZNF211 [Mapview hg19]  ZNF211 [Mapview hg38]
OMIM601856   
Gene and transcription
Genbank (Entrez)AB209273 AB209847 AK026941 AK294869 AK296942
RefSeq transcript (Entrez)NM_001265597 NM_001265598 NM_001265599 NM_001265600 NM_001290231 NM_001322306 NM_006385 NM_198855
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF211
Cluster EST : UnigeneHs.596523 [ NCBI ]
CGAP (NCI)Hs.596523
Alternative Splicing GalleryENSG00000121417
Gene ExpressionZNF211 [ NCBI-GEO ]   ZNF211 [ EBI - ARRAY_EXPRESS ]   ZNF211 [ SEEK ]   ZNF211 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF211 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10520
GTEX Portal (Tissue expression)ZNF211
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13398   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13398  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13398
Splice isoforms : SwissVarQ13398
PhosPhoSitePlusQ13398
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF211
DMDM Disease mutations10520
Blocks (Seattle)ZNF211
SuperfamilyQ13398
Human Protein AtlasENSG00000121417
Peptide AtlasQ13398
HPRD03512
IPIIPI00394844   IPI00746528   IPI00883583   IPI00419492   IPI00915004   IPI00914861   IPI01010822   IPI01010804   IPI01015724   IPI00012868   
Protein Interaction databases
DIP (DOE-UCLA)Q13398
IntAct (EBI)Q13398
FunCoupENSG00000121417
BioGRIDZNF211
STRING (EMBL)ZNF211
ZODIACZNF211
Ontologies - Pathways
QuickGOQ13398
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF211
Atlas of Cancer Signalling NetworkZNF211
Wikipedia pathwaysZNF211
Orthology - Evolution
OrthoDB10520
GeneTree (enSembl)ENSG00000121417
Phylogenetic Trees/Animal Genes : TreeFamZNF211
HOVERGENQ13398
HOGENOMQ13398
Homologs : HomoloGeneZNF211
Homology/Alignments : Family Browser (UCSC)ZNF211
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF211 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF211
dbVarZNF211
ClinVarZNF211
1000_GenomesZNF211 
Exome Variant ServerZNF211
ExAC (Exome Aggregation Consortium)ZNF211 (select the gene name)
Genetic variants : HAPMAP10520
Genomic Variants (DGV)ZNF211 [DGVbeta]
DECIPHERZNF211 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF211 
Mutations
ICGC Data PortalZNF211 
TCGA Data PortalZNF211 
Broad Tumor PortalZNF211
OASIS PortalZNF211 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF211  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF211
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF211
DgiDB (Drug Gene Interaction Database)ZNF211
DoCM (Curated mutations)ZNF211 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF211 (select a term)
intoGenZNF211
Cancer3DZNF211(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601856   
Orphanet
MedgenZNF211
Genetic Testing Registry ZNF211
NextProtQ13398 [Medical]
TSGene10520
GENETestsZNF211
Huge Navigator ZNF211 [HugePedia]
snp3D : Map Gene to Disease10520
BioCentury BCIQZNF211
ClinGenZNF211
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10520
Chemical/Pharm GKB GenePA37582
Clinical trialZNF211
Miscellaneous
canSAR (ICR)ZNF211 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF211
EVEXZNF211
GoPubMedZNF211
iHOPZNF211
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:02:34 CEST 2017

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