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ZNF212 (zinc finger protein 212)

Identity

Alias_symbol (synonym)C2H2-150
Other aliasZNF182
ZNFC150
HGNC (Hugo) ZNF212
LocusID (NCBI) 7988
Atlas_Id 76028
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 149239651 and ends at 149255609 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
GIMAP7 (7q36.1) / ZNF212 (7q36.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF212   13004
Cards
Entrez_Gene (NCBI)ZNF212  7988  zinc finger protein 212
AliasesC2H2-150; ZNF182; ZNFC150
GeneCards (Weizmann)ZNF212
Ensembl hg19 (Hinxton)ENSG00000170260 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170260 [Gene_View]  chr7:149239651-149255609 [Contig_View]  ZNF212 [Vega]
ICGC DataPortalENSG00000170260
TCGA cBioPortalZNF212
AceView (NCBI)ZNF212
Genatlas (Paris)ZNF212
WikiGenes7988
SOURCE (Princeton)ZNF212
Genetics Home Reference (NIH)ZNF212
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF212  -     chr7:149239651-149255609 +  7q36.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF212  -     7q36.1   [Description]    (hg19-Feb_2009)
EnsemblZNF212 - 7q36.1 [CytoView hg19]  ZNF212 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIZNF212 [Mapview hg19]  ZNF212 [Mapview hg38]
OMIM602386   
Gene and transcription
Genbank (Entrez)AI242662 AK074821 AK315086 BC022785 EU446738
RefSeq transcript (Entrez)NM_012256
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF212
Cluster EST : UnigeneHs.490510 [ NCBI ]
CGAP (NCI)Hs.490510
Alternative Splicing GalleryENSG00000170260
Gene ExpressionZNF212 [ NCBI-GEO ]   ZNF212 [ EBI - ARRAY_EXPRESS ]   ZNF212 [ SEEK ]   ZNF212 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF212 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7988
GTEX Portal (Tissue expression)ZNF212
Human Protein AtlasENSG00000170260-ZNF212 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UDV6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UDV6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UDV6
Splice isoforms : SwissVarQ9UDV6
PhosPhoSitePlusQ9UDV6
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)DUF3669_Znf    KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)DUF3669 (PF12417)    KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam12417    pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF212
DMDM Disease mutations7988
Blocks (Seattle)ZNF212
SuperfamilyQ9UDV6
Human Protein Atlas [tissue]ENSG00000170260-ZNF212 [tissue]
Peptide AtlasQ9UDV6
HPRD03859
IPIIPI00220420   IPI00947468   IPI00945310   IPI00945810   
Protein Interaction databases
DIP (DOE-UCLA)Q9UDV6
IntAct (EBI)Q9UDV6
FunCoupENSG00000170260
BioGRIDZNF212
STRING (EMBL)ZNF212
ZODIACZNF212
Ontologies - Pathways
QuickGOQ9UDV6
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  identical protein binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  identical protein binding  
NDEx NetworkZNF212
Atlas of Cancer Signalling NetworkZNF212
Wikipedia pathwaysZNF212
Orthology - Evolution
OrthoDB7988
GeneTree (enSembl)ENSG00000170260
Phylogenetic Trees/Animal Genes : TreeFamZNF212
HOVERGENQ9UDV6
HOGENOMQ9UDV6
Homologs : HomoloGeneZNF212
Homology/Alignments : Family Browser (UCSC)ZNF212
Gene fusions - Rearrangements
Fusion: Tumor Portal ZNF212
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF212 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF212
dbVarZNF212
ClinVarZNF212
1000_GenomesZNF212 
Exome Variant ServerZNF212
ExAC (Exome Aggregation Consortium)ENSG00000170260
GNOMAD BrowserENSG00000170260
Genetic variants : HAPMAP7988
Genomic Variants (DGV)ZNF212 [DGVbeta]
DECIPHERZNF212 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF212 
Mutations
ICGC Data PortalZNF212 
TCGA Data PortalZNF212 
Broad Tumor PortalZNF212
OASIS PortalZNF212 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF212  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF212
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF212
DgiDB (Drug Gene Interaction Database)ZNF212
DoCM (Curated mutations)ZNF212 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF212 (select a term)
intoGenZNF212
Cancer3DZNF212(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602386   
Orphanet
MedgenZNF212
Genetic Testing Registry ZNF212
NextProtQ9UDV6 [Medical]
TSGene7988
GENETestsZNF212
Target ValidationZNF212
Huge Navigator ZNF212 [HugePedia]
snp3D : Map Gene to Disease7988
BioCentury BCIQZNF212
ClinGenZNF212
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7988
Chemical/Pharm GKB GenePA37583
Clinical trialZNF212
Miscellaneous
canSAR (ICR)ZNF212 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF212
EVEXZNF212
GoPubMedZNF212
iHOPZNF212
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:36:43 CET 2017

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