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ZNF219 (zinc finger protein 219)

Identity

Other aliasZFP219
HGNC (Hugo) ZNF219
LocusID (NCBI) 51222
Atlas_Id 76032
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 21090046 and ends at 21099014 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
HNRNPC (14q11.2) / ZNF219 (14q11.2)ZNF219 (14q11.2) / HNRNPC (14q11.2)ZNF219 (14q11.2) / ZNF219 (14q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF219   13011
Cards
Entrez_Gene (NCBI)ZNF219  51222  zinc finger protein 219
AliasesZFP219
GeneCards (Weizmann)ZNF219
Ensembl hg19 (Hinxton)ENSG00000165804 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165804 [Gene_View]  chr14:21090046-21099014 [Contig_View]  ZNF219 [Vega]
ICGC DataPortalENSG00000165804
TCGA cBioPortalZNF219
AceView (NCBI)ZNF219
Genatlas (Paris)ZNF219
WikiGenes51222
SOURCE (Princeton)ZNF219
Genetics Home Reference (NIH)ZNF219
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF219  -     chr14:21090046-21099014 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF219  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblZNF219 - 14q11.2 [CytoView hg19]  ZNF219 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIZNF219 [Mapview hg19]  ZNF219 [Mapview hg38]
OMIM605036   
Gene and transcription
Genbank (Entrez)AB015427 AK056261 AK225811 AK290700 BC000694
RefSeq transcript (Entrez)NM_001101672 NM_001102454 NM_016423
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF219
Cluster EST : UnigeneHs.250493 [ NCBI ]
CGAP (NCI)Hs.250493
Alternative Splicing GalleryENSG00000165804
Gene ExpressionZNF219 [ NCBI-GEO ]   ZNF219 [ EBI - ARRAY_EXPRESS ]   ZNF219 [ SEEK ]   ZNF219 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF219 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51222
GTEX Portal (Tissue expression)ZNF219
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2Y4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2Y4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2Y4
Splice isoforms : SwissVarQ9P2Y4
PhosPhoSitePlusQ9P2Y4
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Histamine_H3_rcpt    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF219
DMDM Disease mutations51222
Blocks (Seattle)ZNF219
SuperfamilyQ9P2Y4
Human Protein AtlasENSG00000165804
Peptide AtlasQ9P2Y4
HPRD05435
IPIIPI00002612   IPI01025890   IPI01025525   IPI01025753   IPI01025246   IPI01025124   IPI01025507   IPI01025369   IPI01024727   
Protein Interaction databases
DIP (DOE-UCLA)Q9P2Y4
IntAct (EBI)Q9P2Y4
FunCoupENSG00000165804
BioGRIDZNF219
STRING (EMBL)ZNF219
ZODIACZNF219
Ontologies - Pathways
QuickGOQ9P2Y4
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II core promoter proximal region sequence-specific DNA binding  transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding  regulation of neurotransmitter levels  DNA binding  transcription factor activity, sequence-specific DNA binding  histamine receptor activity  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  signal transduction  G-protein coupled receptor signaling pathway  multicellular organism development  integral component of membrane  negative regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II core promoter proximal region sequence-specific DNA binding  transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding  regulation of neurotransmitter levels  DNA binding  transcription factor activity, sequence-specific DNA binding  histamine receptor activity  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  signal transduction  G-protein coupled receptor signaling pathway  multicellular organism development  integral component of membrane  negative regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF219
Atlas of Cancer Signalling NetworkZNF219
Wikipedia pathwaysZNF219
Orthology - Evolution
OrthoDB51222
GeneTree (enSembl)ENSG00000165804
Phylogenetic Trees/Animal Genes : TreeFamZNF219
HOVERGENQ9P2Y4
HOGENOMQ9P2Y4
Homologs : HomoloGeneZNF219
Homology/Alignments : Family Browser (UCSC)ZNF219
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF219 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF219
dbVarZNF219
ClinVarZNF219
1000_GenomesZNF219 
Exome Variant ServerZNF219
ExAC (Exome Aggregation Consortium)ZNF219 (select the gene name)
Genetic variants : HAPMAP51222
Genomic Variants (DGV)ZNF219 [DGVbeta]
DECIPHERZNF219 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF219 
Mutations
ICGC Data PortalZNF219 
TCGA Data PortalZNF219 
Broad Tumor PortalZNF219
OASIS PortalZNF219 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF219  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF219
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF219
DgiDB (Drug Gene Interaction Database)ZNF219
DoCM (Curated mutations)ZNF219 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF219 (select a term)
intoGenZNF219
Cancer3DZNF219(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605036   
Orphanet
MedgenZNF219
Genetic Testing Registry ZNF219
NextProtQ9P2Y4 [Medical]
TSGene51222
GENETestsZNF219
Target ValidationZNF219
Huge Navigator ZNF219 [HugePedia]
snp3D : Map Gene to Disease51222
BioCentury BCIQZNF219
ClinGenZNF219
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51222
Chemical/Pharm GKB GenePA37590
Clinical trialZNF219
Miscellaneous
canSAR (ICR)ZNF219 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF219
EVEXZNF219
GoPubMedZNF219
iHOPZNF219
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:50:02 CEST 2017

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