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ZNF224 (zinc finger protein 224)

Identity

Alias_namesZNF255
ZNF27
zinc finger protein 255
zinc finger protein 27
Alias_symbol (synonym)BMZF-2
KOX22
Other aliasBMZF2
ZNF233
HGNC (Hugo) ZNF224
LocusID (NCBI) 7767
Atlas_Id 46356
Location 19q13.31  [Link to chromosome band 19q13]
Location_base_pair Starts at 44094329 and ends at 44109830 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PPP1R37 (19q13.32) / ZNF224 (19q13.31)LRRC68 ZNF224 19q13.31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF224   13017
Cards
Entrez_Gene (NCBI)ZNF224  7767  zinc finger protein 224
AliasesBMZF-2; BMZF2; KOX22; ZNF233; 
ZNF255; ZNF27
GeneCards (Weizmann)ZNF224
Ensembl hg19 (Hinxton)ENSG00000267680 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267680 [Gene_View]  chr19:44094329-44109830 [Contig_View]  ZNF224 [Vega]
ICGC DataPortalENSG00000267680
TCGA cBioPortalZNF224
AceView (NCBI)ZNF224
Genatlas (Paris)ZNF224
WikiGenes7767
SOURCE (Princeton)ZNF224
Genetics Home Reference (NIH)ZNF224
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF224  -     chr19:44094329-44109830 +  19q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF224  -     19q13.31   [Description]    (hg19-Feb_2009)
EnsemblZNF224 - 19q13.31 [CytoView hg19]  ZNF224 - 19q13.31 [CytoView hg38]
Mapping of homologs : NCBIZNF224 [Mapview hg19]  ZNF224 [Mapview hg38]
OMIM194555   
Gene and transcription
Genbank (Entrez)AA554187 AF067164 AF187990 AK292500 AY148489
RefSeq transcript (Entrez)NM_001321645 NM_013398
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF224
Cluster EST : UnigeneHs.744152 [ NCBI ]
CGAP (NCI)Hs.744152
Alternative Splicing GalleryENSG00000267680
Gene ExpressionZNF224 [ NCBI-GEO ]   ZNF224 [ EBI - ARRAY_EXPRESS ]   ZNF224 [ SEEK ]   ZNF224 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF224 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7767
GTEX Portal (Tissue expression)ZNF224
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZL3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NZL3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NZL3
Splice isoforms : SwissVarQ9NZL3
PhosPhoSitePlusQ9NZL3
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF224
DMDM Disease mutations7767
Blocks (Seattle)ZNF224
PDB (SRS)2ELY    2ELZ    2EM0    2EM6    2EM7    2EM8    2EM9    2EN1    2EN8    2ENA    2ENC    2EOQ    2EOR    2EQ4    2YSP    2YTH   
PDB (PDBSum)2ELY    2ELZ    2EM0    2EM6    2EM7    2EM8    2EM9    2EN1    2EN8    2ENA    2ENC    2EOQ    2EOR    2EQ4    2YSP    2YTH   
PDB (IMB)2ELY    2ELZ    2EM0    2EM6    2EM7    2EM8    2EM9    2EN1    2EN8    2ENA    2ENC    2EOQ    2EOR    2EQ4    2YSP    2YTH   
PDB (RSDB)2ELY    2ELZ    2EM0    2EM6    2EM7    2EM8    2EM9    2EN1    2EN8    2ENA    2ENC    2EOQ    2EOR    2EQ4    2YSP    2YTH   
Structural Biology KnowledgeBase2ELY    2ELZ    2EM0    2EM6    2EM7    2EM8    2EM9    2EN1    2EN8    2ENA    2ENC    2EOQ    2EOR    2EQ4    2YSP    2YTH   
SCOP (Structural Classification of Proteins)2ELY    2ELZ    2EM0    2EM6    2EM7    2EM8    2EM9    2EN1    2EN8    2ENA    2ENC    2EOQ    2EOR    2EQ4    2YSP    2YTH   
CATH (Classification of proteins structures)2ELY    2ELZ    2EM0    2EM6    2EM7    2EM8    2EM9    2EN1    2EN8    2ENA    2ENC    2EOQ    2EOR    2EQ4    2YSP    2YTH   
SuperfamilyQ9NZL3
Human Protein AtlasENSG00000267680
Peptide AtlasQ9NZL3
HPRD06094
IPIIPI00396331   IPI00816355   IPI00941943   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZL3
IntAct (EBI)Q9NZL3
FunCoupENSG00000267680
BioGRIDZNF224
STRING (EMBL)ZNF224
ZODIACZNF224
Ontologies - Pathways
QuickGOQ9NZL3
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  transcription, DNA-templated  transcriptional repressor complex  nuclear membrane  negative regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  transcription, DNA-templated  transcriptional repressor complex  nuclear membrane  negative regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF224
Atlas of Cancer Signalling NetworkZNF224
Wikipedia pathwaysZNF224
Orthology - Evolution
OrthoDB7767
GeneTree (enSembl)ENSG00000267680
Phylogenetic Trees/Animal Genes : TreeFamZNF224
HOVERGENQ9NZL3
HOGENOMQ9NZL3
Homologs : HomoloGeneZNF224
Homology/Alignments : Family Browser (UCSC)ZNF224
Gene fusions - Rearrangements
Fusion : MitelmanPPP1R37/ZNF224 [19q13.32/19q13.31]  [t(19;19)(q13;q13)]  
Fusion: TCGALRRC68 ZNF224 19q13.31 HNSC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF224 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF224
dbVarZNF224
ClinVarZNF224
1000_GenomesZNF224 
Exome Variant ServerZNF224
ExAC (Exome Aggregation Consortium)ZNF224 (select the gene name)
Genetic variants : HAPMAP7767
Genomic Variants (DGV)ZNF224 [DGVbeta]
DECIPHERZNF224 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF224 
Mutations
ICGC Data PortalZNF224 
TCGA Data PortalZNF224 
Broad Tumor PortalZNF224
OASIS PortalZNF224 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF224  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF224
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF224
DgiDB (Drug Gene Interaction Database)ZNF224
DoCM (Curated mutations)ZNF224 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF224 (select a term)
intoGenZNF224
Cancer3DZNF224(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194555   
Orphanet
MedgenZNF224
Genetic Testing Registry ZNF224
NextProtQ9NZL3 [Medical]
TSGene7767
GENETestsZNF224
Huge Navigator ZNF224 [HugePedia]
snp3D : Map Gene to Disease7767
BioCentury BCIQZNF224
ClinGenZNF224
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7767
Chemical/Pharm GKB GenePA37596
Clinical trialZNF224
Miscellaneous
canSAR (ICR)ZNF224 (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF224
EVEXZNF224
GoPubMedZNF224
iHOPZNF224
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:44:54 CEST 2017

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