Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZNF226 (zinc finger protein 226)

Identity

Other alias-
HGNC (Hugo) ZNF226
LocusID (NCBI) 7769
Atlas_Id 76038
Location 19q13.31  [Link to chromosome band 19q13]
Location_base_pair Starts at 44669317 and ends at 44681838 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DPYSL3 (5q32) / ZNF226 (19q13.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF226   13019
Cards
Entrez_Gene (NCBI)ZNF226  7769  zinc finger protein 226
Aliases
GeneCards (Weizmann)ZNF226
Ensembl hg19 (Hinxton)ENSG00000167380 [Gene_View]  chr19:44669317-44681838 [Contig_View]  ZNF226 [Vega]
Ensembl hg38 (Hinxton)ENSG00000167380 [Gene_View]  chr19:44669317-44681838 [Contig_View]  ZNF226 [Vega]
ICGC DataPortalENSG00000167380
TCGA cBioPortalZNF226
AceView (NCBI)ZNF226
Genatlas (Paris)ZNF226
WikiGenes7769
SOURCE (Princeton)ZNF226
Genetics Home Reference (NIH)ZNF226
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF226  -     chr19:44669317-44681838 +  19q13.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF226  -     19q13.31   [Description]    (hg38-Dec_2013)
EnsemblZNF226 - 19q13.31 [CytoView hg19]  ZNF226 - 19q13.31 [CytoView hg38]
Mapping of homologs : NCBIZNF226 [Mapview hg19]  ZNF226 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF024707 AF070666 AF228418 AF246126 AK023091
RefSeq transcript (Entrez)NM_001032372 NM_001032373 NM_001032374 NM_001032375 NM_001146220 NM_015919 NM_016444
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZNF226
Cluster EST : UnigeneHs.145956 [ NCBI ]
CGAP (NCI)Hs.145956
Alternative Splicing GalleryENSG00000167380
Gene ExpressionZNF226 [ NCBI-GEO ]   ZNF226 [ EBI - ARRAY_EXPRESS ]   ZNF226 [ SEEK ]   ZNF226 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF226 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7769
GTEX Portal (Tissue expression)ZNF226
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYT6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NYT6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NYT6
Splice isoforms : SwissVarQ9NYT6
PhosPhoSitePlusQ9NYT6
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF226
DMDM Disease mutations7769
Blocks (Seattle)ZNF226
SuperfamilyQ9NYT6
Human Protein AtlasENSG00000167380
Peptide AtlasQ9NYT6
HPRD15751
IPIIPI00063760   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYT6
IntAct (EBI)Q9NYT6
FunCoupENSG00000167380
BioGRIDZNF226
STRING (EMBL)ZNF226
ZODIACZNF226
Ontologies - Pathways
QuickGOQ9NYT6
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF226
Atlas of Cancer Signalling NetworkZNF226
Wikipedia pathwaysZNF226
Orthology - Evolution
OrthoDB7769
GeneTree (enSembl)ENSG00000167380
Phylogenetic Trees/Animal Genes : TreeFamZNF226
HOVERGENQ9NYT6
HOGENOMQ9NYT6
Homologs : HomoloGeneZNF226
Homology/Alignments : Family Browser (UCSC)ZNF226
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF226 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF226
dbVarZNF226
ClinVarZNF226
1000_GenomesZNF226 
Exome Variant ServerZNF226
ExAC (Exome Aggregation Consortium)ZNF226 (select the gene name)
Genetic variants : HAPMAP7769
Genomic Variants (DGV)ZNF226 [DGVbeta]
DECIPHER (Syndromes)19:44669317-44681838  ENSG00000167380
CONAN: Copy Number AnalysisZNF226 
Mutations
ICGC Data PortalZNF226 
TCGA Data PortalZNF226 
Broad Tumor PortalZNF226
OASIS PortalZNF226 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF226  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF226
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF226
DgiDB (Drug Gene Interaction Database)ZNF226
DoCM (Curated mutations)ZNF226 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF226 (select a term)
intoGenZNF226
Cancer3DZNF226(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF226
Genetic Testing Registry ZNF226
NextProtQ9NYT6 [Medical]
TSGene7769
GENETestsZNF226
Huge Navigator ZNF226 [HugePedia]
snp3D : Map Gene to Disease7769
BioCentury BCIQZNF226
ClinGenZNF226
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7769
Chemical/Pharm GKB GenePA37598
Clinical trialZNF226
Miscellaneous
canSAR (ICR)ZNF226 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF226
EVEXZNF226
GoPubMedZNF226
iHOPZNF226
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:52:40 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.