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ZNF234 (zinc finger protein 234)

Identity

Alias_namesZNF269
Alias_symbol (synonym)HZF4
Other alias
HGNC (Hugo) ZNF234
LocusID (NCBI) 10780
Atlas_Id 76044
Location 19q13.31  [Link to chromosome band 19q13]
Location_base_pair Starts at 44141557 and ends at 44160309 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
HNRNPH1 (5q35.3) / ZNF234 (19q13.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF234   13027
Cards
Entrez_Gene (NCBI)ZNF234  10780  zinc finger protein 234
AliasesHZF4; ZNF269
GeneCards (Weizmann)ZNF234
Ensembl hg19 (Hinxton)ENSG00000263002 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263002 [Gene_View]  chr19:44141557-44160309 [Contig_View]  ZNF234 [Vega]
ICGC DataPortalENSG00000263002
TCGA cBioPortalZNF234
AceView (NCBI)ZNF234
Genatlas (Paris)ZNF234
WikiGenes10780
SOURCE (Princeton)ZNF234
Genetics Home Reference (NIH)ZNF234
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF234  -     chr19:44141557-44160309 +  19q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF234  -     19q13.31   [Description]    (hg19-Feb_2009)
EnsemblZNF234 - 19q13.31 [CytoView hg19]  ZNF234 - 19q13.31 [CytoView hg38]
Mapping of homologs : NCBIZNF234 [Mapview hg19]  ZNF234 [Mapview hg38]
OMIM604750   
Gene and transcription
Genbank (Entrez)AF027142 AF027143 AF228417 AH012544 AH012544
RefSeq transcript (Entrez)NM_001144824 NM_006630
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF234
Cluster EST : UnigeneHs.235992 [ NCBI ]
CGAP (NCI)Hs.235992
Alternative Splicing GalleryENSG00000263002
Gene ExpressionZNF234 [ NCBI-GEO ]   ZNF234 [ EBI - ARRAY_EXPRESS ]   ZNF234 [ SEEK ]   ZNF234 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF234 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10780
GTEX Portal (Tissue expression)ZNF234
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14588   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14588  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14588
Splice isoforms : SwissVarQ14588
PhosPhoSitePlusQ14588
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF234
DMDM Disease mutations10780
Blocks (Seattle)ZNF234
SuperfamilyQ14588
Human Protein AtlasENSG00000263002
Peptide AtlasQ14588
HPRD09206
Protein Interaction databases
DIP (DOE-UCLA)Q14588
IntAct (EBI)Q14588
FunCoupENSG00000263002
BioGRIDZNF234
STRING (EMBL)ZNF234
ZODIACZNF234
Ontologies - Pathways
QuickGOQ14588
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF234
Atlas of Cancer Signalling NetworkZNF234
Wikipedia pathwaysZNF234
Orthology - Evolution
OrthoDB10780
GeneTree (enSembl)ENSG00000263002
Phylogenetic Trees/Animal Genes : TreeFamZNF234
HOVERGENQ14588
HOGENOMQ14588
Homologs : HomoloGeneZNF234
Homology/Alignments : Family Browser (UCSC)ZNF234
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF234 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF234
dbVarZNF234
ClinVarZNF234
1000_GenomesZNF234 
Exome Variant ServerZNF234
ExAC (Exome Aggregation Consortium)ZNF234 (select the gene name)
Genetic variants : HAPMAP10780
Genomic Variants (DGV)ZNF234 [DGVbeta]
DECIPHERZNF234 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF234 
Mutations
ICGC Data PortalZNF234 
TCGA Data PortalZNF234 
Broad Tumor PortalZNF234
OASIS PortalZNF234 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF234  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF234
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF234
DgiDB (Drug Gene Interaction Database)ZNF234
DoCM (Curated mutations)ZNF234 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF234 (select a term)
intoGenZNF234
Cancer3DZNF234(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604750   
Orphanet
MedgenZNF234
Genetic Testing Registry ZNF234
NextProtQ14588 [Medical]
TSGene10780
GENETestsZNF234
Target ValidationZNF234
Huge Navigator ZNF234 [HugePedia]
snp3D : Map Gene to Disease10780
BioCentury BCIQZNF234
ClinGenZNF234
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10780
Chemical/Pharm GKB GenePA37605
Clinical trialZNF234
Miscellaneous
canSAR (ICR)ZNF234 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF234
EVEXZNF234
GoPubMedZNF234
iHOPZNF234
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:50:04 CEST 2017

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