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ZNF251 (zinc finger protein 251)

Identity

Other alias-
HGNC (Hugo) ZNF251
LocusID (NCBI) 90987
Atlas_Id 76051
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 144720909 and ends at 144755585 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ADAM32 (8p11.22) / ZNF251 (8q24.3)ZNF251 (8q24.3) / CTSF (11q13.2)ZNF251 (8q24.3) / FAHD2B (2q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF251   13045
Cards
Entrez_Gene (NCBI)ZNF251  90987  zinc finger protein 251
Aliases
GeneCards (Weizmann)ZNF251
Ensembl hg19 (Hinxton)ENSG00000198169 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198169 [Gene_View]  chr8:144720909-144755585 [Contig_View]  ZNF251 [Vega]
ICGC DataPortalENSG00000198169
TCGA cBioPortalZNF251
AceView (NCBI)ZNF251
Genatlas (Paris)ZNF251
WikiGenes90987
SOURCE (Princeton)ZNF251
Genetics Home Reference (NIH)ZNF251
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF251  -     chr8:144720909-144755585 -  8q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF251  -     8q24.3   [Description]    (hg19-Feb_2009)
EnsemblZNF251 - 8q24.3 [CytoView hg19]  ZNF251 - 8q24.3 [CytoView hg38]
Mapping of homologs : NCBIZNF251 [Mapview hg19]  ZNF251 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000435 AK027286 AK091638 BC006258 BC093984
RefSeq transcript (Entrez)NM_138367
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_187569
Consensus coding sequences : CCDS (NCBI)ZNF251
Cluster EST : UnigeneHs.534516 [ NCBI ]
CGAP (NCI)Hs.534516
Alternative Splicing GalleryENSG00000198169
Gene ExpressionZNF251 [ NCBI-GEO ]   ZNF251 [ EBI - ARRAY_EXPRESS ]   ZNF251 [ SEEK ]   ZNF251 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF251 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90987
GTEX Portal (Tissue expression)ZNF251
Human Protein AtlasENSG00000198169-ZNF251 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BRH9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BRH9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BRH9
Splice isoforms : SwissVarQ9BRH9
PhosPhoSitePlusQ9BRH9
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF251
DMDM Disease mutations90987
Blocks (Seattle)ZNF251
SuperfamilyQ9BRH9
Human Protein Atlas [tissue]ENSG00000198169-ZNF251 [tissue]
Peptide AtlasQ9BRH9
IPIIPI00855790   IPI00980466   
Protein Interaction databases
DIP (DOE-UCLA)Q9BRH9
IntAct (EBI)Q9BRH9
FunCoupENSG00000198169
BioGRIDZNF251
STRING (EMBL)ZNF251
ZODIACZNF251
Ontologies - Pathways
QuickGOQ9BRH9
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF251
Atlas of Cancer Signalling NetworkZNF251
Wikipedia pathwaysZNF251
Orthology - Evolution
OrthoDB90987
GeneTree (enSembl)ENSG00000198169
Phylogenetic Trees/Animal Genes : TreeFamZNF251
HOVERGENQ9BRH9
HOGENOMQ9BRH9
Homologs : HomoloGeneZNF251
Homology/Alignments : Family Browser (UCSC)ZNF251
Gene fusions - Rearrangements
Tumor Fusion PortalZNF251
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF251 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF251
dbVarZNF251
ClinVarZNF251
1000_GenomesZNF251 
Exome Variant ServerZNF251
ExAC (Exome Aggregation Consortium)ENSG00000198169
GNOMAD BrowserENSG00000198169
Genetic variants : HAPMAP90987
Genomic Variants (DGV)ZNF251 [DGVbeta]
DECIPHERZNF251 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF251 
Mutations
ICGC Data PortalZNF251 
TCGA Data PortalZNF251 
Broad Tumor PortalZNF251
OASIS PortalZNF251 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF251  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF251
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF251
DgiDB (Drug Gene Interaction Database)ZNF251
DoCM (Curated mutations)ZNF251 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF251 (select a term)
intoGenZNF251
Cancer3DZNF251(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF251
MedgenZNF251
Genetic Testing Registry ZNF251
NextProtQ9BRH9 [Medical]
TSGene90987
GENETestsZNF251
Target ValidationZNF251
Huge Navigator ZNF251 [HugePedia]
snp3D : Map Gene to Disease90987
BioCentury BCIQZNF251
ClinGenZNF251
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90987
Chemical/Pharm GKB GenePA37623
Clinical trialZNF251
Miscellaneous
canSAR (ICR)ZNF251 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF251
EVEXZNF251
GoPubMedZNF251
iHOPZNF251
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:19:13 CET 2017

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