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ZNF257 (zinc finger protein 257)

Identity

Alias_symbol (synonym)BMZF-4
Other aliasBMZF4
HGNC (Hugo) ZNF257
LocusID (NCBI) 113835
Atlas_Id 76057
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 22052448 and ends at 22091101 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF257   13498
Cards
Entrez_Gene (NCBI)ZNF257  113835  zinc finger protein 257
AliasesBMZF-4; BMZF4
GeneCards (Weizmann)ZNF257
Ensembl hg19 (Hinxton)ENSG00000197134 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197134 [Gene_View]  chr19:22052448-22091101 [Contig_View]  ZNF257 [Vega]
ICGC DataPortalENSG00000197134
TCGA cBioPortalZNF257
AceView (NCBI)ZNF257
Genatlas (Paris)ZNF257
WikiGenes113835
SOURCE (Princeton)ZNF257
Genetics Home Reference (NIH)ZNF257
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF257  -     chr19:22052448-22091101 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF257  -     19p12   [Description]    (hg19-Feb_2009)
EnsemblZNF257 - 19p12 [CytoView hg19]  ZNF257 - 19p12 [CytoView hg38]
Mapping of homologs : NCBIZNF257 [Mapview hg19]  ZNF257 [Mapview hg38]
OMIM606957   
Gene and transcription
Genbank (Entrez)AF070651 AK056694 BC020045 BC036446 BI553764
RefSeq transcript (Entrez)NM_001316996 NM_001316997 NM_001316998 NM_033468
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF257
Cluster EST : UnigeneHs.283900 [ NCBI ]
CGAP (NCI)Hs.283900
Alternative Splicing GalleryENSG00000197134
Gene ExpressionZNF257 [ NCBI-GEO ]   ZNF257 [ EBI - ARRAY_EXPRESS ]   ZNF257 [ SEEK ]   ZNF257 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF257 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)113835
GTEX Portal (Tissue expression)ZNF257
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2Q1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2Q1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2Q1
Splice isoforms : SwissVarQ9Y2Q1
PhosPhoSitePlusQ9Y2Q1
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF257
DMDM Disease mutations113835
Blocks (Seattle)ZNF257
SuperfamilyQ9Y2Q1
Human Protein AtlasENSG00000197134
Peptide AtlasQ9Y2Q1
HPRD06096
IPIIPI01008970   IPI00294232   IPI00939809   IPI01009008   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2Q1
IntAct (EBI)Q9Y2Q1
FunCoupENSG00000197134
BioGRIDZNF257
STRING (EMBL)ZNF257
ZODIACZNF257
Ontologies - Pathways
QuickGOQ9Y2Q1
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  
NDEx NetworkZNF257
Atlas of Cancer Signalling NetworkZNF257
Wikipedia pathwaysZNF257
Orthology - Evolution
OrthoDB113835
GeneTree (enSembl)ENSG00000197134
Phylogenetic Trees/Animal Genes : TreeFamZNF257
HOVERGENQ9Y2Q1
HOGENOMQ9Y2Q1
Homologs : HomoloGeneZNF257
Homology/Alignments : Family Browser (UCSC)ZNF257
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF257 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF257
dbVarZNF257
ClinVarZNF257
1000_GenomesZNF257 
Exome Variant ServerZNF257
ExAC (Exome Aggregation Consortium)ZNF257 (select the gene name)
Genetic variants : HAPMAP113835
Genomic Variants (DGV)ZNF257 [DGVbeta]
DECIPHERZNF257 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF257 
Mutations
ICGC Data PortalZNF257 
TCGA Data PortalZNF257 
Broad Tumor PortalZNF257
OASIS PortalZNF257 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF257  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF257
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF257
DgiDB (Drug Gene Interaction Database)ZNF257
DoCM (Curated mutations)ZNF257 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF257 (select a term)
intoGenZNF257
Cancer3DZNF257(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606957   
Orphanet
MedgenZNF257
Genetic Testing Registry ZNF257
NextProtQ9Y2Q1 [Medical]
TSGene113835
GENETestsZNF257
Target ValidationZNF257
Huge Navigator ZNF257 [HugePedia]
snp3D : Map Gene to Disease113835
BioCentury BCIQZNF257
ClinGenZNF257
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD113835
Chemical/Pharm GKB GenePA37786
Clinical trialZNF257
Miscellaneous
canSAR (ICR)ZNF257 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF257
EVEXZNF257
GoPubMedZNF257
iHOPZNF257
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:33 CEST 2017

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