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ZNF257 (zinc finger protein 257)

Identity

Alias (NCBI)BMZF-4
BMZF4
HGNC (Hugo) ZNF257
HGNC Alias symbBMZF-4
LocusID (NCBI) 113835
Atlas_Id 76057
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 22052484 and ends at 22091462 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF257   13498
Cards
Entrez_Gene (NCBI)ZNF257    zinc finger protein 257
AliasesBMZF-4; BMZF4
GeneCards (Weizmann)ZNF257
Ensembl hg19 (Hinxton)ENSG00000197134 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197134 [Gene_View]  ENSG00000197134 [Sequence]  chr19:22052484-22091462 [Contig_View]  ZNF257 [Vega]
ICGC DataPortalENSG00000197134
TCGA cBioPortalZNF257
AceView (NCBI)ZNF257
Genatlas (Paris)ZNF257
SOURCE (Princeton)ZNF257
Genetics Home Reference (NIH)ZNF257
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF257  -     chr19:22052484-22091462 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF257  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF257 - 19p12 [CytoView hg19]  ZNF257 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000197134
Genome Data Viewer NCBIZNF257 [Mapview hg19]  
OMIM606957   
Gene and transcription
Genbank (Entrez)AF070651 AK056694 BC020045 BC036446 BI553764
RefSeq transcript (Entrez)NM_001316996 NM_001316997 NM_001316998 NM_033468
Consensus coding sequences : CCDS (NCBI)ZNF257
Gene ExpressionZNF257 [ NCBI-GEO ]   ZNF257 [ EBI - ARRAY_EXPRESS ]   ZNF257 [ SEEK ]   ZNF257 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF257 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF257 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)113835
GTEX Portal (Tissue expression)ZNF257
Human Protein AtlasENSG00000197134-ZNF257 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2Q1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2Q1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2Q1
PhosPhoSitePlusQ9Y2Q1
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF257
SuperfamilyQ9Y2Q1
AlphaFold pdb e-kbQ9Y2Q1   
Human Protein Atlas [tissue]ENSG00000197134-ZNF257 [tissue]
HPRD06096
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2Q1
IntAct (EBI)Q9Y2Q1
BioGRIDZNF257
STRING (EMBL)ZNF257
ZODIACZNF257
Ontologies - Pathways
QuickGOQ9Y2Q1
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF257
Atlas of Cancer Signalling NetworkZNF257
Wikipedia pathwaysZNF257
Orthology - Evolution
OrthoDB113835
GeneTree (enSembl)ENSG00000197134
Phylogenetic Trees/Animal Genes : TreeFamZNF257
Homologs : HomoloGeneZNF257
Homology/Alignments : Family Browser (UCSC)ZNF257
Gene fusions - Rearrangements
Fusion : QuiverZNF257
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF257 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF257
dbVarZNF257
ClinVarZNF257
MonarchZNF257
1000_GenomesZNF257 
Exome Variant ServerZNF257
GNOMAD BrowserENSG00000197134
Varsome BrowserZNF257
ACMGZNF257 variants
VarityQ9Y2Q1
Genomic Variants (DGV)ZNF257 [DGVbeta]
DECIPHERZNF257 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF257 
Mutations
ICGC Data PortalZNF257 
TCGA Data PortalZNF257 
Broad Tumor PortalZNF257
OASIS PortalZNF257 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF257  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF257
Mutations and Diseases : HGMDZNF257
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF257
DgiDB (Drug Gene Interaction Database)ZNF257
DoCM (Curated mutations)ZNF257
CIViC (Clinical Interpretations of Variants in Cancer)ZNF257
Cancer3DZNF257
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606957   
Orphanet
DisGeNETZNF257
MedgenZNF257
Genetic Testing Registry ZNF257
NextProtQ9Y2Q1 [Medical]
GENETestsZNF257
Target ValidationZNF257
Huge Navigator ZNF257 [HugePedia]
ClinGenZNF257
Clinical trials, drugs, therapy
MyCancerGenomeZNF257
Protein Interactions : CTDZNF257
Pharm GKB GenePA37786
PharosQ9Y2Q1
Clinical trialZNF257
Miscellaneous
canSAR (ICR)ZNF257
HarmonizomeZNF257
ARCHS4ZNF257
DataMed IndexZNF257
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF257
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:59:28 CET 2022

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