Atlas of Genetics and Cytogenetics in Oncology and Haematology

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ZNF263 (zinc finger protein 263)

Identity

Alias (NCBI)FPM315
ZKSCAN12
ZSCAN44
HGNC (Hugo) ZNF263
HGNC Alias symbFPM315
ZKSCAN12
ZSCAN44
LocusID (NCBI) 10127
Atlas_Id 76061
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 3283487 and ends at 3291459 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DCN (12q21.33) / ZNF263 (16p13.3)ZNF263 (16p13.3) / KCTD5 (16p13.3)ZNF263 (16p13.3) / ZNF263 (16p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  ZNF263/KCTD5 (16p13)

External links

Nomenclature
HGNC (Hugo)ZNF263   13056
Cards
Entrez_Gene (NCBI)ZNF263  10127  zinc finger protein 263
AliasesFPM315; ZKSCAN12; ZSCAN44
GeneCards (Weizmann)ZNF263
Ensembl hg19 (Hinxton)ENSG00000006194 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000006194 [Gene_View]  ENSG00000006194 [Sequence]  chr16:3283487-3291459 [Contig_View]  ZNF263 [Vega]
ICGC DataPortalENSG00000006194
TCGA cBioPortalZNF263
AceView (NCBI)ZNF263
Genatlas (Paris)ZNF263
WikiGenes10127
SOURCE (Princeton)ZNF263
Genetics Home Reference (NIH)ZNF263
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF263  -     chr16:3283487-3291459 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF263  -     16p13.3   [Description]    (hg19-Feb_2009)
GoldenPathZNF263 - 16p13.3 [CytoView hg19]  ZNF263 - 16p13.3 [CytoView hg38]
ImmunoBaseENSG00000006194
genome Data Viewer NCBIZNF263 [Mapview hg19]  
OMIM604191   
Gene and transcription
Genbank (Entrez)AK295350 AK312421 BC008805 D88827
RefSeq transcript (Entrez)NM_005741
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF263
Alternative Splicing GalleryENSG00000006194
Gene ExpressionZNF263 [ NCBI-GEO ]   ZNF263 [ EBI - ARRAY_EXPRESS ]   ZNF263 [ SEEK ]   ZNF263 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF263 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF263 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10127
GTEX Portal (Tissue expression)ZNF263
Human Protein AtlasENSG00000006194-ZNF263 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14978   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14978  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14978
Splice isoforms : SwissVarO14978
PhosPhoSitePlusO14978
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    SCAN_BOX (PS50804)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    SCAN_dom    SCAN_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    SCAN (PF02023)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam02023    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  SCAN (SM00431)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF263
DMDM Disease mutations10127
Blocks (Seattle)ZNF263
SuperfamilyO14978
Human Protein Atlas [tissue]ENSG00000006194-ZNF263 [tissue]
Peptide AtlasO14978
HPRD05008
IPIIPI00298951   IPI01012678   
Protein Interaction databases
DIP (DOE-UCLA)O14978
IntAct (EBI)O14978
FunCoupENSG00000006194
BioGRIDZNF263
STRING (EMBL)ZNF263
ZODIACZNF263
Ontologies - Pathways
QuickGOO14978
Ontology : AmiGOnegative regulation of transcription by RNA polymerase II  DNA-binding transcription repressor activity, RNA polymerase II-specific  DNA-binding transcription factor activity  protein binding  nucleus  regulation of transcription, DNA-templated  sequence-specific DNA binding  negative regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBInegative regulation of transcription by RNA polymerase II  DNA-binding transcription repressor activity, RNA polymerase II-specific  DNA-binding transcription factor activity  protein binding  nucleus  regulation of transcription, DNA-templated  sequence-specific DNA binding  negative regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF263
Atlas of Cancer Signalling NetworkZNF263
Wikipedia pathwaysZNF263
Orthology - Evolution
OrthoDB10127
GeneTree (enSembl)ENSG00000006194
Phylogenetic Trees/Animal Genes : TreeFamZNF263
HOGENOMO14978
Homologs : HomoloGeneZNF263
Homology/Alignments : Family Browser (UCSC)ZNF263
Gene fusions - Rearrangements
Fusion : QuiverZNF263
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF263 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF263
dbVarZNF263
ClinVarZNF263
1000_GenomesZNF263 
Exome Variant ServerZNF263
GNOMAD BrowserENSG00000006194
Varsome BrowserZNF263
Genetic variants : HAPMAP10127
Genomic Variants (DGV)ZNF263 [DGVbeta]
DECIPHERZNF263 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF263 
Mutations
ICGC Data PortalZNF263 
TCGA Data PortalZNF263 
Broad Tumor PortalZNF263
OASIS PortalZNF263 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF263  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF263
Mutations and Diseases : HGMDZNF263
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF263
DgiDB (Drug Gene Interaction Database)ZNF263
DoCM (Curated mutations)ZNF263 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF263 (select a term)
intoGenZNF263
Cancer3DZNF263(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604191   
Orphanet
DisGeNETZNF263
MedgenZNF263
Genetic Testing Registry ZNF263
NextProtO14978 [Medical]
TSGene10127
GENETestsZNF263
Target ValidationZNF263
Huge Navigator ZNF263 [HugePedia]
snp3D : Map Gene to Disease10127
BioCentury BCIQZNF263
ClinGenZNF263
Clinical trials, drugs, therapy
Protein Interactions : CTD10127
Pharm GKB GenePA37634
Clinical trialZNF263
Miscellaneous
canSAR (ICR)ZNF263 (select the gene name)
HarmonizomeZNF263
DataMed IndexZNF263
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF263
EVEXZNF263
GoPubMedZNF263
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:36:24 CEST 2020
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