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ZNF267 (zinc finger protein 267)

Identity

Alias_symbol (synonym)HZF2
Other alias
HGNC (Hugo) ZNF267
LocusID (NCBI) 10308
Atlas_Id 52585
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 31885079 and ends at 31928629 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MVP (16p11.2) / ZNF267 (16p11.2)ZNF267 (16p11.2) / AGBL4 (1p33)MVP 16p11.2 / ZNF267 16p11.2
ZNF267 16p11.2 / AGBL4 1p33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF267   13060
Cards
Entrez_Gene (NCBI)ZNF267  10308  zinc finger protein 267
AliasesHZF2
GeneCards (Weizmann)ZNF267
Ensembl hg19 (Hinxton)ENSG00000185947 [Gene_View]  chr16:31885079-31928629 [Contig_View]  ZNF267 [Vega]
Ensembl hg38 (Hinxton)ENSG00000185947 [Gene_View]  chr16:31885079-31928629 [Contig_View]  ZNF267 [Vega]
ICGC DataPortalENSG00000185947
TCGA cBioPortalZNF267
AceView (NCBI)ZNF267
Genatlas (Paris)ZNF267
WikiGenes10308
SOURCE (Princeton)ZNF267
Genetics Home Reference (NIH)ZNF267
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF267  -     chr16:31885079-31928629 +  16p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF267  -     16p11.2   [Description]    (hg38-Dec_2013)
EnsemblZNF267 - 16p11.2 [CytoView hg19]  ZNF267 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIZNF267 [Mapview hg19]  ZNF267 [Mapview hg38]
OMIM604752   
Gene and transcription
Genbank (Entrez)AA570774 AF220492 AI636367 AK096390 AK292573
RefSeq transcript (Entrez)NM_001265588 NM_003414
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187260 NW_004929400
Consensus coding sequences : CCDS (NCBI)ZNF267
Cluster EST : UnigeneHs.460645 [ NCBI ]
CGAP (NCI)Hs.460645
Alternative Splicing GalleryENSG00000185947
Gene ExpressionZNF267 [ NCBI-GEO ]   ZNF267 [ EBI - ARRAY_EXPRESS ]   ZNF267 [ SEEK ]   ZNF267 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF267 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10308
GTEX Portal (Tissue expression)ZNF267
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14586   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14586  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14586
Splice isoforms : SwissVarQ14586
PhosPhoSitePlusQ14586
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF267
DMDM Disease mutations10308
Blocks (Seattle)ZNF267
SuperfamilyQ14586
Human Protein AtlasENSG00000185947
Peptide AtlasQ14586
HPRD06883
IPIIPI00479998   IPI01013438   
Protein Interaction databases
DIP (DOE-UCLA)Q14586
IntAct (EBI)Q14586
FunCoupENSG00000185947
BioGRIDZNF267
STRING (EMBL)ZNF267
ZODIACZNF267
Ontologies - Pathways
QuickGOQ14586
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  multicellular organism development  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  multicellular organism development  metal ion binding  
NDEx NetworkZNF267
Atlas of Cancer Signalling NetworkZNF267
Wikipedia pathwaysZNF267
Orthology - Evolution
OrthoDB10308
GeneTree (enSembl)ENSG00000185947
Phylogenetic Trees/Animal Genes : TreeFamZNF267
HOVERGENQ14586
HOGENOMQ14586
Homologs : HomoloGeneZNF267
Homology/Alignments : Family Browser (UCSC)ZNF267
Gene fusions - Rearrangements
Fusion : MitelmanMVP/ZNF267 [16p11.2/16p11.2]  [t(16;16)(p11;p11)]  
Fusion : MitelmanZNF267/AGBL4 [16p11.2/1p33]  [t(1;16)(p33;p11)]  
Fusion: TCGAMVP 16p11.2 ZNF267 16p11.2 HNSC
Fusion: TCGAZNF267 16p11.2 AGBL4 1p33 BLCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF267 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF267
dbVarZNF267
ClinVarZNF267
1000_GenomesZNF267 
Exome Variant ServerZNF267
ExAC (Exome Aggregation Consortium)ZNF267 (select the gene name)
Genetic variants : HAPMAP10308
Genomic Variants (DGV)ZNF267 [DGVbeta]
DECIPHER (Syndromes)16:31885079-31928629  ENSG00000185947
CONAN: Copy Number AnalysisZNF267 
Mutations
ICGC Data PortalZNF267 
TCGA Data PortalZNF267 
Broad Tumor PortalZNF267
OASIS PortalZNF267 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF267  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF267
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF267
DgiDB (Drug Gene Interaction Database)ZNF267
DoCM (Curated mutations)ZNF267 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF267 (select a term)
intoGenZNF267
Cancer3DZNF267(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604752   
Orphanet
MedgenZNF267
Genetic Testing Registry ZNF267
NextProtQ14586 [Medical]
TSGene10308
GENETestsZNF267
Huge Navigator ZNF267 [HugePedia]
snp3D : Map Gene to Disease10308
BioCentury BCIQZNF267
ClinGenZNF267
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10308
Chemical/Pharm GKB GenePA37638
Clinical trialZNF267
Miscellaneous
canSAR (ICR)ZNF267 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF267
EVEXZNF267
GoPubMedZNF267
iHOPZNF267
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:35:00 CET 2017

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