Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZNF273 (zinc finger protein 273)

Identity

Alias_symbol (synonym)HZF9
Other alias
HGNC (Hugo) ZNF273
LocusID (NCBI) 10793
Atlas_Id 76065
Location 7q11.21  [Link to chromosome band 7q11]
Location_base_pair Starts at 64903242 and ends at 64931577 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SGCD (5q33.3) / ZNF273 (7q11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF273   13067
Cards
Entrez_Gene (NCBI)ZNF273  10793  zinc finger protein 273
AliasesHZF9
GeneCards (Weizmann)ZNF273
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:64903242-64931577 [Contig_View]  ZNF273 [Vega]
TCGA cBioPortalZNF273
AceView (NCBI)ZNF273
Genatlas (Paris)ZNF273
WikiGenes10793
SOURCE (Princeton)ZNF273
Genetics Home Reference (NIH)ZNF273
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF273  -     chr7:64903242-64931577 +  7q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF273  -     7q11.21   [Description]    (hg19-Feb_2009)
EnsemblZNF273 - 7q11.21 [CytoView hg19]  ZNF273 - 7q11.21 [CytoView hg38]
Mapping of homologs : NCBIZNF273 [Mapview hg19]  ZNF273 [Mapview hg38]
OMIM604756   
Gene and transcription
Genbank (Entrez)AK090648 AL832810 BC007078 BC008386 BC019234
RefSeq transcript (Entrez)NM_021148 NM_033548
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF273
Cluster EST : UnigeneHs.520889 [ NCBI ]
CGAP (NCI)Hs.520889
Gene ExpressionZNF273 [ NCBI-GEO ]   ZNF273 [ EBI - ARRAY_EXPRESS ]   ZNF273 [ SEEK ]   ZNF273 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF273 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10793
GTEX Portal (Tissue expression)ZNF273
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14593   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14593  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14593
Splice isoforms : SwissVarQ14593
PhosPhoSitePlusQ14593
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF273
DMDM Disease mutations10793
Blocks (Seattle)ZNF273
SuperfamilyQ14593
Peptide AtlasQ14593
HPRD07264
IPIIPI00853359   IPI00874095   IPI00074338   IPI00984470   
Protein Interaction databases
DIP (DOE-UCLA)Q14593
IntAct (EBI)Q14593
BioGRIDZNF273
STRING (EMBL)ZNF273
ZODIACZNF273
Ontologies - Pathways
QuickGOQ14593
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF273
Atlas of Cancer Signalling NetworkZNF273
Wikipedia pathwaysZNF273
Orthology - Evolution
OrthoDB10793
Phylogenetic Trees/Animal Genes : TreeFamZNF273
HOVERGENQ14593
HOGENOMQ14593
Homologs : HomoloGeneZNF273
Homology/Alignments : Family Browser (UCSC)ZNF273
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF273 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF273
dbVarZNF273
ClinVarZNF273
1000_GenomesZNF273 
Exome Variant ServerZNF273
ExAC (Exome Aggregation Consortium)ZNF273 (select the gene name)
Genetic variants : HAPMAP10793
Genomic Variants (DGV)ZNF273 [DGVbeta]
DECIPHERZNF273 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF273 
Mutations
ICGC Data PortalZNF273 
TCGA Data PortalZNF273 
Broad Tumor PortalZNF273
OASIS PortalZNF273 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF273  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF273
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF273
DgiDB (Drug Gene Interaction Database)ZNF273
DoCM (Curated mutations)ZNF273 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF273 (select a term)
intoGenZNF273
Cancer3DZNF273(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604756   
Orphanet
MedgenZNF273
Genetic Testing Registry ZNF273
NextProtQ14593 [Medical]
TSGene10793
GENETestsZNF273
Target ValidationZNF273
Huge Navigator ZNF273 [HugePedia]
snp3D : Map Gene to Disease10793
BioCentury BCIQZNF273
ClinGenZNF273
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10793
Chemical/Pharm GKB GenePA37643
Clinical trialZNF273
Miscellaneous
canSAR (ICR)ZNF273 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF273
EVEXZNF273
GoPubMedZNF273
iHOPZNF273
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:44:34 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.