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ZNF284 (zinc finger protein 284)

Identity

Alias_symbol (synonym)DKFZp781F1775
Other aliasZNF284L
HGNC (Hugo) ZNF284
LocusID (NCBI) 342909
Atlas_Id 76074
Location 19q13.31  [Link to chromosome band 19q13]
Location_base_pair Starts at 44072144 and ends at 44089613 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF284   13078
Cards
Entrez_Gene (NCBI)ZNF284  342909  zinc finger protein 284
AliasesZNF284L
GeneCards (Weizmann)ZNF284
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:44072144-44089613 [Contig_View]  ZNF284 [Vega]
TCGA cBioPortalZNF284
AceView (NCBI)ZNF284
Genatlas (Paris)ZNF284
WikiGenes342909
SOURCE (Princeton)ZNF284
Genetics Home Reference (NIH)ZNF284
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF284  -     chr19:44072144-44089613 +  19q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF284  -     19q13.31   [Description]    (hg19-Feb_2009)
EnsemblZNF284 - 19q13.31 [CytoView hg19]  ZNF284 - 19q13.31 [CytoView hg38]
Mapping of homologs : NCBIZNF284 [Mapview hg19]  ZNF284 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK308295 AY166789 AY458845 BC156663 BM989725
RefSeq transcript (Entrez)NM_001037813
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF284
Cluster EST : UnigeneHs.720813 [ NCBI ]
CGAP (NCI)Hs.720813
Gene ExpressionZNF284 [ NCBI-GEO ]   ZNF284 [ EBI - ARRAY_EXPRESS ]   ZNF284 [ SEEK ]   ZNF284 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF284 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)342909
GTEX Portal (Tissue expression)ZNF284
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2VY69   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2VY69  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2VY69
Splice isoforms : SwissVarQ2VY69
PhosPhoSitePlusQ2VY69
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF284
DMDM Disease mutations342909
Blocks (Seattle)ZNF284
SuperfamilyQ2VY69
Peptide AtlasQ2VY69
IPIIPI00455396   
Protein Interaction databases
DIP (DOE-UCLA)Q2VY69
IntAct (EBI)Q2VY69
BioGRIDZNF284
STRING (EMBL)ZNF284
ZODIACZNF284
Ontologies - Pathways
QuickGOQ2VY69
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF284
Atlas of Cancer Signalling NetworkZNF284
Wikipedia pathwaysZNF284
Orthology - Evolution
OrthoDB342909
Phylogenetic Trees/Animal Genes : TreeFamZNF284
HOVERGENQ2VY69
HOGENOMQ2VY69
Homologs : HomoloGeneZNF284
Homology/Alignments : Family Browser (UCSC)ZNF284
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF284 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF284
dbVarZNF284
ClinVarZNF284
1000_GenomesZNF284 
Exome Variant ServerZNF284
ExAC (Exome Aggregation Consortium)ZNF284 (select the gene name)
Genetic variants : HAPMAP342909
Genomic Variants (DGV)ZNF284 [DGVbeta]
DECIPHERZNF284 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF284 
Mutations
ICGC Data PortalZNF284 
TCGA Data PortalZNF284 
Broad Tumor PortalZNF284
OASIS PortalZNF284 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF284  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF284
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF284
DgiDB (Drug Gene Interaction Database)ZNF284
DoCM (Curated mutations)ZNF284 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF284 (select a term)
intoGenZNF284
Cancer3DZNF284(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF284
Genetic Testing Registry ZNF284
NextProtQ2VY69 [Medical]
TSGene342909
GENETestsZNF284
Target ValidationZNF284
Huge Navigator ZNF284 [HugePedia]
snp3D : Map Gene to Disease342909
BioCentury BCIQZNF284
ClinGenZNF284
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD342909
Chemical/Pharm GKB GenePA37654
Clinical trialZNF284
Miscellaneous
canSAR (ICR)ZNF284 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF284
EVEXZNF284
GoPubMedZNF284
iHOPZNF284
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:50:10 CEST 2017

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