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ZNF286A (zinc finger protein 286A)

Identity

Alias_namesZNF286
zinc finger protein 286
Alias_symbol (synonym)KIAA1874
Other alias
HGNC (Hugo) ZNF286A
LocusID (NCBI) 57335
Atlas_Id 76076
Location 17p12  [Link to chromosome band 17p12]
Location_base_pair Starts at 15699577 and ends at 15720786 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF286A   13501
Cards
Entrez_Gene (NCBI)ZNF286A  57335  zinc finger protein 286A
AliasesZNF286
GeneCards (Weizmann)ZNF286A
Ensembl hg19 (Hinxton)ENSG00000187607 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187607 [Gene_View]  chr17:15699577-15720786 [Contig_View]  ZNF286A [Vega]
ICGC DataPortalENSG00000187607
TCGA cBioPortalZNF286A
AceView (NCBI)ZNF286A
Genatlas (Paris)ZNF286A
WikiGenes57335
SOURCE (Princeton)ZNF286A
Genetics Home Reference (NIH)ZNF286A
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF286A  -     chr17:15699577-15720786 +  17p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF286A  -     17p12   [Description]    (hg19-Feb_2009)
EnsemblZNF286A - 17p12 [CytoView hg19]  ZNF286A - 17p12 [CytoView hg38]
Mapping of homologs : NCBIZNF286A [Mapview hg19]  ZNF286A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086305 AF217226 AK021478 AK055651 AK092259
RefSeq transcript (Entrez)NM_001130842 NM_001288642 NM_001288643 NM_001288644 NM_001288645 NM_001288646 NM_001288647 NM_001288648 NM_001288649 NM_020652
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF286A
Cluster EST : UnigeneHs.659318 [ NCBI ]
CGAP (NCI)Hs.659318
Alternative Splicing GalleryENSG00000187607
Gene ExpressionZNF286A [ NCBI-GEO ]   ZNF286A [ EBI - ARRAY_EXPRESS ]   ZNF286A [ SEEK ]   ZNF286A [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF286A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57335
GTEX Portal (Tissue expression)ZNF286A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HBT8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HBT8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HBT8
Splice isoforms : SwissVarQ9HBT8
PhosPhoSitePlusQ9HBT8
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)    zf-H2C2_2 (PF13465)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912    pfam13465   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF286A
DMDM Disease mutations57335
Blocks (Seattle)ZNF286A
SuperfamilyQ9HBT8
Human Protein AtlasENSG00000187607
Peptide AtlasQ9HBT8
HPRD15760
IPIIPI00010163   IPI00793248   IPI00790741   
Protein Interaction databases
DIP (DOE-UCLA)Q9HBT8
IntAct (EBI)Q9HBT8
FunCoupENSG00000187607
BioGRIDZNF286A
STRING (EMBL)ZNF286A
ZODIACZNF286A
Ontologies - Pathways
QuickGOQ9HBT8
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF286A
Atlas of Cancer Signalling NetworkZNF286A
Wikipedia pathwaysZNF286A
Orthology - Evolution
OrthoDB57335
GeneTree (enSembl)ENSG00000187607
Phylogenetic Trees/Animal Genes : TreeFamZNF286A
HOVERGENQ9HBT8
HOGENOMQ9HBT8
Homologs : HomoloGeneZNF286A
Homology/Alignments : Family Browser (UCSC)ZNF286A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF286A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF286A
dbVarZNF286A
ClinVarZNF286A
1000_GenomesZNF286A 
Exome Variant ServerZNF286A
ExAC (Exome Aggregation Consortium)ZNF286A (select the gene name)
Genetic variants : HAPMAP57335
Genomic Variants (DGV)ZNF286A [DGVbeta]
DECIPHERZNF286A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF286A 
Mutations
ICGC Data PortalZNF286A 
TCGA Data PortalZNF286A 
Broad Tumor PortalZNF286A
OASIS PortalZNF286A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF286A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF286A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF286A
DgiDB (Drug Gene Interaction Database)ZNF286A
DoCM (Curated mutations)ZNF286A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF286A (select a term)
intoGenZNF286A
Cancer3DZNF286A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF286A
Genetic Testing Registry ZNF286A
NextProtQ9HBT8 [Medical]
TSGene57335
GENETestsZNF286A
Target ValidationZNF286A
Huge Navigator ZNF286A [HugePedia]
snp3D : Map Gene to Disease57335
BioCentury BCIQZNF286A
ClinGenZNF286A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57335
Chemical/Pharm GKB GenePA162410066
Clinical trialZNF286A
Miscellaneous
canSAR (ICR)ZNF286A (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF286A
EVEXZNF286A
GoPubMedZNF286A
iHOPZNF286A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:35 CEST 2017

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