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ZNF295-AS1 (ZNF295 antisense RNA 1)

Identity

Alias_namesC21orf121
NCRNA00318
chromosome 21 open reading frame 121
non-protein coding RNA 318
ZNF295 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)PRED87
Other alias
HGNC (Hugo) ZNF295-AS1
LocusID (NCBI) 150142
Atlas_Id 76080
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 42022083 and ends at 42024951 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF295-AS1   23130
Cards
Entrez_Gene (NCBI)ZNF295-AS1  150142  ZNF295 antisense RNA 1
AliasesC21orf121; NCRNA00318; PRED87
GeneCards (Weizmann)ZNF295-AS1
Ensembl hg19 (Hinxton)ENSG00000237232 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237232 [Gene_View]  chr21:42022083-42024951 [Contig_View]  ZNF295-AS1 [Vega]
ICGC DataPortalENSG00000237232
TCGA cBioPortalZNF295-AS1
AceView (NCBI)ZNF295-AS1
Genatlas (Paris)ZNF295-AS1
WikiGenes150142
SOURCE (Princeton)ZNF295-AS1
Genetics Home Reference (NIH)ZNF295-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF295-AS1  -     chr21:42022083-42024951 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF295-AS1  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblZNF295-AS1 - 21q22.3 [CytoView hg19]  ZNF295-AS1 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBIZNF295-AS1 [Mapview hg19]  ZNF295-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055167 BC029588 BC061917 BI464310 DB455362
RefSeq transcript (Entrez)NM_198078
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF295-AS1
Cluster EST : UnigeneHs.626078 [ NCBI ]
CGAP (NCI)Hs.626078
Alternative Splicing GalleryENSG00000237232
Gene ExpressionZNF295-AS1 [ NCBI-GEO ]   ZNF295-AS1 [ EBI - ARRAY_EXPRESS ]   ZNF295-AS1 [ SEEK ]   ZNF295-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF295-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)150142
GTEX Portal (Tissue expression)ZNF295-AS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N0V1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N0V1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N0V1
Splice isoforms : SwissVarQ8N0V1
PhosPhoSitePlusQ8N0V1
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZNF295-AS1
DMDM Disease mutations150142
Blocks (Seattle)ZNF295-AS1
SuperfamilyQ8N0V1
Human Protein AtlasENSG00000237232
Peptide AtlasQ8N0V1
HPRD10735
IPIIPI00295658   
Protein Interaction databases
DIP (DOE-UCLA)Q8N0V1
IntAct (EBI)Q8N0V1
FunCoupENSG00000237232
BioGRIDZNF295-AS1
STRING (EMBL)ZNF295-AS1
ZODIACZNF295-AS1
Ontologies - Pathways
QuickGOQ8N0V1
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkZNF295-AS1
Atlas of Cancer Signalling NetworkZNF295-AS1
Wikipedia pathwaysZNF295-AS1
Orthology - Evolution
OrthoDB150142
GeneTree (enSembl)ENSG00000237232
Phylogenetic Trees/Animal Genes : TreeFamZNF295-AS1
HOVERGENQ8N0V1
HOGENOMQ8N0V1
Homologs : HomoloGeneZNF295-AS1
Homology/Alignments : Family Browser (UCSC)ZNF295-AS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF295-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF295-AS1
dbVarZNF295-AS1
ClinVarZNF295-AS1
1000_GenomesZNF295-AS1 
Exome Variant ServerZNF295-AS1
ExAC (Exome Aggregation Consortium)ZNF295-AS1 (select the gene name)
Genetic variants : HAPMAP150142
Genomic Variants (DGV)ZNF295-AS1 [DGVbeta]
DECIPHERZNF295-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF295-AS1 
Mutations
ICGC Data PortalZNF295-AS1 
TCGA Data PortalZNF295-AS1 
Broad Tumor PortalZNF295-AS1
OASIS PortalZNF295-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF295-AS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF295-AS1
DgiDB (Drug Gene Interaction Database)ZNF295-AS1
DoCM (Curated mutations)ZNF295-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF295-AS1 (select a term)
intoGenZNF295-AS1
Cancer3DZNF295-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF295-AS1
Genetic Testing Registry ZNF295-AS1
NextProtQ8N0V1 [Medical]
TSGene150142
GENETestsZNF295-AS1
Target ValidationZNF295-AS1
Huge Navigator ZNF295-AS1 [HugePedia]
snp3D : Map Gene to Disease150142
BioCentury BCIQZNF295-AS1
ClinGenZNF295-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150142
Chemical/Pharm GKB GenePA134985227
Clinical trialZNF295-AS1
Miscellaneous
canSAR (ICR)ZNF295-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF295-AS1
EVEXZNF295-AS1
GoPubMedZNF295-AS1
iHOPZNF295-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:50:11 CEST 2017

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