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ZNF319 (zinc finger protein 319)

Identity

Alias_symbol (synonym)KIAA1388
Zfp319
Other aliasZFP319
HGNC (Hugo) ZNF319
LocusID (NCBI) 57567
Atlas_Id 76091
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 57994668 and ends at 57999858 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF319   13644
Cards
Entrez_Gene (NCBI)ZNF319  57567  zinc finger protein 319
AliasesZFP319
GeneCards (Weizmann)ZNF319
Ensembl hg19 (Hinxton)ENSG00000166188 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166188 [Gene_View]  chr16:57994668-57999858 [Contig_View]  ZNF319 [Vega]
ICGC DataPortalENSG00000166188
TCGA cBioPortalZNF319
AceView (NCBI)ZNF319
Genatlas (Paris)ZNF319
WikiGenes57567
SOURCE (Princeton)ZNF319
Genetics Home Reference (NIH)ZNF319
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF319  -     chr16:57994668-57999858 -  16q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF319  -     16q21   [Description]    (hg19-Feb_2009)
EnsemblZNF319 - 16q21 [CytoView hg19]  ZNF319 - 16q21 [CytoView hg38]
Mapping of homologs : NCBIZNF319 [Mapview hg19]  ZNF319 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB037809 BC093919 BC101767 EU446835
RefSeq transcript (Entrez)NM_020807
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF319
Cluster EST : UnigeneHs.129268 [ NCBI ]
CGAP (NCI)Hs.129268
Alternative Splicing GalleryENSG00000166188
Gene ExpressionZNF319 [ NCBI-GEO ]   ZNF319 [ EBI - ARRAY_EXPRESS ]   ZNF319 [ SEEK ]   ZNF319 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF319 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57567
GTEX Portal (Tissue expression)ZNF319
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2F9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2F9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2F9
Splice isoforms : SwissVarQ9P2F9
PhosPhoSitePlusQ9P2F9
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)    zf-H2C2_2 (PF13465)   
Domain families : Pfam (NCBI)pfam00096    pfam13465   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF319
DMDM Disease mutations57567
Blocks (Seattle)ZNF319
SuperfamilyQ9P2F9
Human Protein AtlasENSG00000166188
Peptide AtlasQ9P2F9
HPRD18326
IPIIPI00023084   
Protein Interaction databases
DIP (DOE-UCLA)Q9P2F9
IntAct (EBI)Q9P2F9
FunCoupENSG00000166188
BioGRIDZNF319
STRING (EMBL)ZNF319
ZODIACZNF319
Ontologies - Pathways
QuickGOQ9P2F9
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF319
Atlas of Cancer Signalling NetworkZNF319
Wikipedia pathwaysZNF319
Orthology - Evolution
OrthoDB57567
GeneTree (enSembl)ENSG00000166188
Phylogenetic Trees/Animal Genes : TreeFamZNF319
HOVERGENQ9P2F9
HOGENOMQ9P2F9
Homologs : HomoloGeneZNF319
Homology/Alignments : Family Browser (UCSC)ZNF319
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF319 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF319
dbVarZNF319
ClinVarZNF319
1000_GenomesZNF319 
Exome Variant ServerZNF319
ExAC (Exome Aggregation Consortium)ZNF319 (select the gene name)
Genetic variants : HAPMAP57567
Genomic Variants (DGV)ZNF319 [DGVbeta]
DECIPHERZNF319 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF319 
Mutations
ICGC Data PortalZNF319 
TCGA Data PortalZNF319 
Broad Tumor PortalZNF319
OASIS PortalZNF319 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF319  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF319
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF319
DgiDB (Drug Gene Interaction Database)ZNF319
DoCM (Curated mutations)ZNF319 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF319 (select a term)
intoGenZNF319
Cancer3DZNF319(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF319
Genetic Testing Registry ZNF319
NextProtQ9P2F9 [Medical]
TSGene57567
GENETestsZNF319
Target ValidationZNF319
Huge Navigator ZNF319 [HugePedia]
snp3D : Map Gene to Disease57567
BioCentury BCIQZNF319
ClinGenZNF319
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57567
Chemical/Pharm GKB GenePA134937483
Clinical trialZNF319
Miscellaneous
canSAR (ICR)ZNF319 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF319
EVEXZNF319
GoPubMedZNF319
iHOPZNF319
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:37 CEST 2017

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