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ZNF32 (zinc finger protein 32)

Identity

Alias_nameszinc finger protein 32 (KOX 30)
Alias_symbol (synonym)KOX30
Other alias
HGNC (Hugo) ZNF32
LocusID (NCBI) 7580
Atlas_Id 55591
Location 10q11.21  [Link to chromosome band 10q11]
Location_base_pair Starts at 43643859 and ends at 43648799 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF32   13095
Cards
Entrez_Gene (NCBI)ZNF32  7580  zinc finger protein 32
AliasesKOX30
GeneCards (Weizmann)ZNF32
Ensembl hg19 (Hinxton)ENSG00000169740 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169740 [Gene_View]  chr10:43643859-43648799 [Contig_View]  ZNF32 [Vega]
ICGC DataPortalENSG00000169740
TCGA cBioPortalZNF32
AceView (NCBI)ZNF32
Genatlas (Paris)ZNF32
WikiGenes7580
SOURCE (Princeton)ZNF32
Genetics Home Reference (NIH)ZNF32
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF32  -     chr10:43643859-43648799 -  10q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF32  -     10q11.21   [Description]    (hg19-Feb_2009)
EnsemblZNF32 - 10q11.21 [CytoView hg19]  ZNF32 - 10q11.21 [CytoView hg38]
Mapping of homologs : NCBIZNF32 [Mapview hg19]  ZNF32 [Mapview hg38]
OMIM194539   
Gene and transcription
Genbank (Entrez)AI871265 AK309483 AK312132 BC022842 BG477527
RefSeq transcript (Entrez)NM_001005368 NM_001324164 NM_001324165 NM_001324166 NM_001324167 NM_001324168 NM_006973
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF32
Cluster EST : UnigeneHs.608956 [ NCBI ]
CGAP (NCI)Hs.608956
Alternative Splicing GalleryENSG00000169740
Gene ExpressionZNF32 [ NCBI-GEO ]   ZNF32 [ EBI - ARRAY_EXPRESS ]   ZNF32 [ SEEK ]   ZNF32 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF32 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7580
GTEX Portal (Tissue expression)ZNF32
Protein : pattern, domain, 3D structure
UniProt/SwissProtP17041   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP17041  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP17041
Splice isoforms : SwissVarP17041
PhosPhoSitePlusP17041
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF32
DMDM Disease mutations7580
Blocks (Seattle)ZNF32
PDB (SRS)2EPC    2EPT    2EPU    2YTA    2YTB   
PDB (PDBSum)2EPC    2EPT    2EPU    2YTA    2YTB   
PDB (IMB)2EPC    2EPT    2EPU    2YTA    2YTB   
PDB (RSDB)2EPC    2EPT    2EPU    2YTA    2YTB   
Structural Biology KnowledgeBase2EPC    2EPT    2EPU    2YTA    2YTB   
SCOP (Structural Classification of Proteins)2EPC    2EPT    2EPU    2YTA    2YTB   
CATH (Classification of proteins structures)2EPC    2EPT    2EPU    2YTA    2YTB   
SuperfamilyP17041
Human Protein AtlasENSG00000169740
Peptide AtlasP17041
HPRD01924
IPIIPI00012411   
Protein Interaction databases
DIP (DOE-UCLA)P17041
IntAct (EBI)P17041
FunCoupENSG00000169740
BioGRIDZNF32
STRING (EMBL)ZNF32
ZODIACZNF32
Ontologies - Pathways
QuickGOP17041
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF32
Atlas of Cancer Signalling NetworkZNF32
Wikipedia pathwaysZNF32
Orthology - Evolution
OrthoDB7580
GeneTree (enSembl)ENSG00000169740
Phylogenetic Trees/Animal Genes : TreeFamZNF32
HOVERGENP17041
HOGENOMP17041
Homologs : HomoloGeneZNF32
Homology/Alignments : Family Browser (UCSC)ZNF32
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF32 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF32
dbVarZNF32
ClinVarZNF32
1000_GenomesZNF32 
Exome Variant ServerZNF32
ExAC (Exome Aggregation Consortium)ZNF32 (select the gene name)
Genetic variants : HAPMAP7580
Genomic Variants (DGV)ZNF32 [DGVbeta]
DECIPHERZNF32 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF32 
Mutations
ICGC Data PortalZNF32 
TCGA Data PortalZNF32 
Broad Tumor PortalZNF32
OASIS PortalZNF32 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF32  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF32
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF32
DgiDB (Drug Gene Interaction Database)ZNF32
DoCM (Curated mutations)ZNF32 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF32 (select a term)
intoGenZNF32
Cancer3DZNF32(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194539   
Orphanet
MedgenZNF32
Genetic Testing Registry ZNF32
NextProtP17041 [Medical]
TSGene7580
GENETestsZNF32
Target ValidationZNF32
Huge Navigator ZNF32 [HugePedia]
snp3D : Map Gene to Disease7580
BioCentury BCIQZNF32
ClinGenZNF32
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7580
Chemical/Pharm GKB GenePA37670
Clinical trialZNF32
Miscellaneous
canSAR (ICR)ZNF32 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF32
EVEXZNF32
GoPubMedZNF32
iHOPZNF32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:19:28 CEST 2017

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