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ZNF32 (zinc finger protein 32)

Identity

Alias (NCBI)KOX30
ZNF637
Zfp637
HGNC (Hugo) ZNF32
HGNC Alias symbKOX30
ZNF637
Zfp637
HGNC Previous namezinc finger protein 32 (KOX 30)
LocusID (NCBI) 7580
Atlas_Id 55591
Location 10q11.21  [Link to chromosome band 10q11]
Location_base_pair Starts at 43643862 and ends at 43648881 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF32   13095
Cards
Entrez_Gene (NCBI)ZNF32    zinc finger protein 32
AliasesKOX30; ZNF637; Zfp637
GeneCards (Weizmann)ZNF32
Ensembl hg19 (Hinxton)ENSG00000169740 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169740 [Gene_View]  ENSG00000169740 [Sequence]  chr10:43643862-43648881 [Contig_View]  ZNF32 [Vega]
ICGC DataPortalENSG00000169740
TCGA cBioPortalZNF32
AceView (NCBI)ZNF32
Genatlas (Paris)ZNF32
SOURCE (Princeton)ZNF32
Genetics Home Reference (NIH)ZNF32
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF32  -     chr10:43643862-43648881 -  10q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF32  -     10q11.21   [Description]    (hg19-Feb_2009)
GoldenPathZNF32 - 10q11.21 [CytoView hg19]  ZNF32 - 10q11.21 [CytoView hg38]
ImmunoBaseENSG00000169740
Genome Data Viewer NCBIZNF32 [Mapview hg19]  
OMIM194539   
Gene and transcription
Genbank (Entrez)AI871265 AK309483 AK312132 BC022842 BG477527
RefSeq transcript (Entrez)NM_001005368 NM_001324164 NM_001324165 NM_001324166 NM_001324167 NM_001324168 NM_006973
Consensus coding sequences : CCDS (NCBI)ZNF32
Gene ExpressionZNF32 [ NCBI-GEO ]   ZNF32 [ EBI - ARRAY_EXPRESS ]   ZNF32 [ SEEK ]   ZNF32 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF32 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF32 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7580
GTEX Portal (Tissue expression)ZNF32
Human Protein AtlasENSG00000169740-ZNF32 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP17041   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP17041  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP17041
PhosPhoSitePlusP17041
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF32
PDB (RSDB)2EPC    2EPT    2EPU    2YTA    2YTB   
PDB Europe2EPC    2EPT    2EPU    2YTA    2YTB   
PDB (PDBSum)2EPC    2EPT    2EPU    2YTA    2YTB   
PDB (IMB)2EPC    2EPT    2EPU    2YTA    2YTB   
Structural Biology KnowledgeBase2EPC    2EPT    2EPU    2YTA    2YTB   
SCOP (Structural Classification of Proteins)2EPC    2EPT    2EPU    2YTA    2YTB   
CATH (Classification of proteins structures)2EPC    2EPT    2EPU    2YTA    2YTB   
SuperfamilyP17041
AlphaFold pdb e-kbP17041   
Human Protein Atlas [tissue]ENSG00000169740-ZNF32 [tissue]
HPRD01924
Protein Interaction databases
DIP (DOE-UCLA)P17041
IntAct (EBI)P17041
BioGRIDZNF32
STRING (EMBL)ZNF32
ZODIACZNF32
Ontologies - Pathways
QuickGOP17041
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  protein binding  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  sequence-specific double-stranded DNA binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  protein binding  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  sequence-specific double-stranded DNA binding  
NDEx NetworkZNF32
Atlas of Cancer Signalling NetworkZNF32
Wikipedia pathwaysZNF32
Orthology - Evolution
OrthoDB7580
GeneTree (enSembl)ENSG00000169740
Phylogenetic Trees/Animal Genes : TreeFamZNF32
Homologs : HomoloGeneZNF32
Homology/Alignments : Family Browser (UCSC)ZNF32
Gene fusions - Rearrangements
Fusion : QuiverZNF32
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF32 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF32
dbVarZNF32
ClinVarZNF32
MonarchZNF32
1000_GenomesZNF32 
Exome Variant ServerZNF32
GNOMAD BrowserENSG00000169740
Varsome BrowserZNF32
ACMGZNF32 variants
VarityP17041
Genomic Variants (DGV)ZNF32 [DGVbeta]
DECIPHERZNF32 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF32 
Mutations
ICGC Data PortalZNF32 
TCGA Data PortalZNF32 
Broad Tumor PortalZNF32
OASIS PortalZNF32 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF32  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF32
Mutations and Diseases : HGMDZNF32
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF32
DgiDB (Drug Gene Interaction Database)ZNF32
DoCM (Curated mutations)ZNF32
CIViC (Clinical Interpretations of Variants in Cancer)ZNF32
Cancer3DZNF32
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194539   
Orphanet
DisGeNETZNF32
MedgenZNF32
Genetic Testing Registry ZNF32
NextProtP17041 [Medical]
GENETestsZNF32
Target ValidationZNF32
Huge Navigator ZNF32 [HugePedia]
ClinGenZNF32
Clinical trials, drugs, therapy
MyCancerGenomeZNF32
Protein Interactions : CTDZNF32
Pharm GKB GenePA37670
PharosP17041
Clinical trialZNF32
Miscellaneous
canSAR (ICR)ZNF32
HarmonizomeZNF32
DataMed IndexZNF32
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:39:13 CEST 2021

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