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ZNF320 (zinc finger protein 320)

Identity

Alias (NCBI)ZFPL
HGNC (Hugo) ZNF320
HGNC Alias symbZFPL
DKFZp686G16228
LocusID (NCBI) 162967
Atlas_Id 53063
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 52876172 and ends at 52897694 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CACNG6 (19q13.42) / ZNF320 (19q13.41)MGC72080 (7q21.3) / ZNF320 (19q13.41)PHIP (6q14.1) / ZNF320 (19q13.41)
WDR11 (10q26.12) / ZNF320 (19q13.41)ZNF320 (19q13.41) / TMEM192 (4q32.3)ZNF320 (19q13.41) / WDR11 (10q26.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  inv(19)(q13q13) CACNG6/ZNF320

External links

Nomenclature
HGNC (Hugo)ZNF320   13842
Cards
Entrez_Gene (NCBI)ZNF320    zinc finger protein 320
AliasesZFPL
GeneCards (Weizmann)ZNF320
Ensembl hg19 (Hinxton)ENSG00000182986 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182986 [Gene_View]  ENSG00000182986 [Sequence]  chr19:52876172-52897694 [Contig_View]  ZNF320 [Vega]
ICGC DataPortalENSG00000182986
TCGA cBioPortalZNF320
AceView (NCBI)ZNF320
Genatlas (Paris)ZNF320
SOURCE (Princeton)ZNF320
Genetics Home Reference (NIH)ZNF320
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF320  -     chr19:52876172-52897694 -  19q13.41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF320  -     19q13.41   [Description]    (hg19-Feb_2009)
GoldenPathZNF320 - 19q13.41 [CytoView hg19]  ZNF320 - 19q13.41 [CytoView hg38]
ImmunoBaseENSG00000182986
genome Data Viewer NCBIZNF320 [Mapview hg19]  
OMIM606427   
Gene and transcription
Genbank (Entrez)AF086262 AI344388 AK054877 AK094328 AK095630
RefSeq transcript (Entrez)NM_001351773 NM_001351774 NM_001351775 NM_001351776 NM_001351777 NM_207333
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF320
Alternative Splicing GalleryENSG00000182986
Gene ExpressionZNF320 [ NCBI-GEO ]   ZNF320 [ EBI - ARRAY_EXPRESS ]   ZNF320 [ SEEK ]   ZNF320 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF320 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF320 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)162967
GTEX Portal (Tissue expression)ZNF320
Human Protein AtlasENSG00000182986-ZNF320 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA2RRD8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA2RRD8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA2RRD8
Splice isoforms : SwissVarA2RRD8
PhosPhoSitePlusA2RRD8
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF320
Blocks (Seattle)ZNF320
SuperfamilyA2RRD8
Human Protein Atlas [tissue]ENSG00000182986-ZNF320 [tissue]
Peptide AtlasA2RRD8
HPRD18506
IPIIPI00413972   
Protein Interaction databases
DIP (DOE-UCLA)A2RRD8
IntAct (EBI)A2RRD8
BioGRIDZNF320
STRING (EMBL)ZNF320
ZODIACZNF320
Ontologies - Pathways
QuickGOA2RRD8
Ontology : AmiGODNA binding  protein binding  nucleus  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF320
Atlas of Cancer Signalling NetworkZNF320
Wikipedia pathwaysZNF320
Orthology - Evolution
OrthoDB162967
GeneTree (enSembl)ENSG00000182986
Phylogenetic Trees/Animal Genes : TreeFamZNF320
HOGENOMA2RRD8
Homologs : HomoloGeneZNF320
Homology/Alignments : Family Browser (UCSC)ZNF320
Gene fusions - Rearrangements
Fusion : MitelmanCACNG6/ZNF320 [19q13.42/19q13.41]  
Fusion : QuiverZNF320
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF320 [hg38]
dbVarZNF320
ClinVarZNF320
MonarchZNF320
1000_GenomesZNF320 
Exome Variant ServerZNF320
GNOMAD BrowserENSG00000182986
Varsome BrowserZNF320
Genomic Variants (DGV)ZNF320 [DGVbeta]
DECIPHERZNF320 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF320 
Mutations
ICGC Data PortalZNF320 
TCGA Data PortalZNF320 
Broad Tumor PortalZNF320
OASIS PortalZNF320 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF320  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF320
Mutations and Diseases : HGMDZNF320
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF320
DgiDB (Drug Gene Interaction Database)ZNF320
DoCM (Curated mutations)ZNF320 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF320 (select a term)
intoGenZNF320
Cancer3DZNF320(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606427   
Orphanet
DisGeNETZNF320
MedgenZNF320
Genetic Testing Registry ZNF320
NextProtA2RRD8 [Medical]
GENETestsZNF320
Target ValidationZNF320
Huge Navigator ZNF320 [HugePedia]
ClinGenZNF320
Clinical trials, drugs, therapy
MyCancerGenomeZNF320
Protein Interactions : CTD
Pharm GKB GenePA37819
PharosA2RRD8
Clinical trialZNF320
Miscellaneous
canSAR (ICR)ZNF320 (select the gene name)
HarmonizomeZNF320
DataMed IndexZNF320
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF320
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jan 1 18:45:16 CET 2021
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