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ZNF320 (zinc finger protein 320)

Identity

Alias_symbol (synonym)ZFPL
DKFZp686G16228
Other alias
HGNC (Hugo) ZNF320
LocusID (NCBI) 162967
Atlas_Id 53063
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 52876172 and ends at 52891346 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CACNG6 (19q13.42) / ZNF320 (19q13.41)MGC72080 (7q21.3) / ZNF320 (19q13.41)PHIP (6q14.1) / ZNF320 (19q13.41)
WDR11 (10q26.12) / ZNF320 (19q13.41)ZNF320 (19q13.41) / TMEM192 (4q32.3)ZNF320 (19q13.41) / WDR11 (10q26.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF320   13842
Cards
Entrez_Gene (NCBI)ZNF320  162967  zinc finger protein 320
AliasesZFPL
GeneCards (Weizmann)ZNF320
Ensembl hg19 (Hinxton)ENSG00000182986 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182986 [Gene_View]  chr19:52876172-52891346 [Contig_View]  ZNF320 [Vega]
ICGC DataPortalENSG00000182986
TCGA cBioPortalZNF320
AceView (NCBI)ZNF320
Genatlas (Paris)ZNF320
WikiGenes162967
SOURCE (Princeton)ZNF320
Genetics Home Reference (NIH)ZNF320
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF320  -     chr19:52876172-52891346 -  19q13.41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF320  -     19q13.41   [Description]    (hg19-Feb_2009)
EnsemblZNF320 - 19q13.41 [CytoView hg19]  ZNF320 - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBIZNF320 [Mapview hg19]  ZNF320 [Mapview hg38]
OMIM606427   
Gene and transcription
Genbank (Entrez)AF086262 AK054877 AK094328 AK095630 AK096348
RefSeq transcript (Entrez)NM_207333
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF320
Cluster EST : UnigeneHs.369632 [ NCBI ]
CGAP (NCI)Hs.369632
Alternative Splicing GalleryENSG00000182986
Gene ExpressionZNF320 [ NCBI-GEO ]   ZNF320 [ EBI - ARRAY_EXPRESS ]   ZNF320 [ SEEK ]   ZNF320 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF320 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)162967
GTEX Portal (Tissue expression)ZNF320
Protein : pattern, domain, 3D structure
UniProt/SwissProtA2RRD8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA2RRD8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA2RRD8
Splice isoforms : SwissVarA2RRD8
PhosPhoSitePlusA2RRD8
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF320
DMDM Disease mutations162967
Blocks (Seattle)ZNF320
SuperfamilyA2RRD8
Human Protein AtlasENSG00000182986
Peptide AtlasA2RRD8
HPRD18506
IPIIPI00413972   
Protein Interaction databases
DIP (DOE-UCLA)A2RRD8
IntAct (EBI)A2RRD8
FunCoupENSG00000182986
BioGRIDZNF320
STRING (EMBL)ZNF320
ZODIACZNF320
Ontologies - Pathways
QuickGOA2RRD8
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF320
Atlas of Cancer Signalling NetworkZNF320
Wikipedia pathwaysZNF320
Orthology - Evolution
OrthoDB162967
GeneTree (enSembl)ENSG00000182986
Phylogenetic Trees/Animal Genes : TreeFamZNF320
HOVERGENA2RRD8
HOGENOMA2RRD8
Homologs : HomoloGeneZNF320
Homology/Alignments : Family Browser (UCSC)ZNF320
Gene fusions - Rearrangements
Fusion : MitelmanCACNG6/ZNF320 [19q13.42/19q13.41]  [inv(19)(q13q13)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF320 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF320
dbVarZNF320
ClinVarZNF320
1000_GenomesZNF320 
Exome Variant ServerZNF320
ExAC (Exome Aggregation Consortium)ZNF320 (select the gene name)
Genetic variants : HAPMAP162967
Genomic Variants (DGV)ZNF320 [DGVbeta]
DECIPHERZNF320 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF320 
Mutations
ICGC Data PortalZNF320 
TCGA Data PortalZNF320 
Broad Tumor PortalZNF320
OASIS PortalZNF320 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF320  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF320
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF320
DgiDB (Drug Gene Interaction Database)ZNF320
DoCM (Curated mutations)ZNF320 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF320 (select a term)
intoGenZNF320
Cancer3DZNF320(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606427   
Orphanet
MedgenZNF320
Genetic Testing Registry ZNF320
NextProtA2RRD8 [Medical]
TSGene162967
GENETestsZNF320
Target ValidationZNF320
Huge Navigator ZNF320 [HugePedia]
snp3D : Map Gene to Disease162967
BioCentury BCIQZNF320
ClinGenZNF320
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD162967
Chemical/Pharm GKB GenePA37819
Clinical trialZNF320
Miscellaneous
canSAR (ICR)ZNF320 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF320
EVEXZNF320
GoPubMedZNF320
iHOPZNF320
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 13:03:44 CEST 2017

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